RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 IGLV1-40P01703 118 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 NME2P22392 152 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 ARNTP27540 789 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 RXRBP28702 533 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 DYMQ7RTS9 669 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 FBXO33Q7Z6M2 555 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 FBLIM1Q8WUP2 373 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 KCNB2Q92953 911 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 CEP44Q9C0F1 390 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 PARP2Q9UGN5 583 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 ACTL7BQ9Y614 415 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 AK5Q9Y6K8 562 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 TCF3P15923 654 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 NFIAQ12857 509 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 RNF43Q68DV7 783 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 SLC51AQ86UW1 340 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 ANKRD24Q8TF21 1146 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 KRT82Q9NSB4 513 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 AP4E1Q9UPM8 1137 aa6.73□□□□□ -1.33
LINC00393-202ENST00000452852 URB2Q14146 1524 aaKnown RBP6.72□□□□□ -1.33
LINC00393-202ENST00000452852 GSC2O15499 205 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 BMP6P22004 513 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 IRAK1P51617 712 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
LINC00393-202ENST00000452852 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 EMILIN2Q9BXX0 1053 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 PPP1R9AQ9ULJ8 1098 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 TTF2Q9UNY4 1162 aaKnown RBP6.72□□□□□ -1.33
LINC00393-202ENST00000452852 SYNGAP1Q96PV0 1343 aa6.72□□□□□ -1.33
LINC00393-202ENST00000452852 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 CELA3AP09093 270 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 RAB6AP20340 208 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 ASPAP45381 313 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 DAB2P98082 770 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
LINC00393-202ENST00000452852 ZNF252P-AS1Q0IIN9 211 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 PSMD2Q13200 908 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 NFKBIBQ15653 356 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 MPRIPQ6WCQ1 1025 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 FAM161BQ96MY7 647 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 GSX1Q9H4S2 264 aaPredicted RBP6.71□□□□□ -1.34
LINC00393-202ENST00000452852 RNF114Q9Y508 228 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 CCDC88BA6NC98 1476 aa6.71□□□□□ -1.34
LINC00393-202ENST00000452852 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.7□□□□□ -1.34
LINC00393-202ENST00000452852 NFICP08651 508 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 RASIP1Q5U651 963 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 EZH1Q92800 747 aaPredicted RBP6.7□□□□□ -1.34
LINC00393-202ENST00000452852 DBNDD2Q9BQY9 259 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 PCMTD2Q9NV79 361 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 RNF112Q9ULX5 631 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 PCDHGC5Q9Y5F6 944 aa6.7□□□□□ -1.34
LINC00393-202ENST00000452852 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC00393-202ENST00000452852 ID3Q02535 119 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 SV2BQ7L1I2 683 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 TMC4Q7Z404 712 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 ZDHHC13Q8IUH4 622 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 ACSS3Q9H6R3 686 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 CACNA2D2Q9NY47 1150 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 ABCC8Q09428 1581 aa6.69□□□□□ -1.34
LINC00393-202ENST00000452852 TGFB1P01137 390 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 MEI1Q5TIA1 1274 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 PCNX4Q63HM2 1172 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 LLGL2Q6P1M3 1020 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 SHKBP1Q8TBC3 707 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 ACSBG1Q96GR2 724 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 FANCD2OSQ96PS1 177 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 SEMA6CQ9H3T2 930 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 DISC1Q9NRI5 854 aa6.68□□□□□ -1.34
LINC00393-202ENST00000452852 IFT140Q96RY7 1462 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 WDR64B1ANS9 1081 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 TRIM37O94972 964 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 RECKO95980 971 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 CTSHP09668 335 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 VAMP1P23763 118 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 MAP7Q14244 749 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 LRRC14Q15048 493 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 CCDC85BQ15834 202 aaPredicted RBP6.67□□□□□ -1.34
LINC00393-202ENST00000452852 TSNAXIP1Q2TAA8 658 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 ZC3H12AQ5D1E8 599 aaKnown RBP6.67□□□□□ -1.34
LINC00393-202ENST00000452852 FBXL6Q8N531 539 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 ATXN3LQ9H3M9 355 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 LGR6Q9HBX8 967 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 CYP8B1Q9UNU6 501 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 DAGLAQ9Y4D2 1042 aa6.67□□□□□ -1.34
LINC00393-202ENST00000452852 TOPBP1Q92547 1522 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 DNMBPQ6XZF7 1577 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 F13BP05160 661 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 ADMP35318 185 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms