RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RDXP35241 583 aaKnown RBP18.87■□□□□ 0.61
TCOF1-206ENST00000445265 CDC42BPGQ6DT37 1551 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 MYL10Q9BUA6 226 aa18.87■□□□□ 0.61
TCOF1-206ENST00000445265 USP8P40818 1118 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 LUC7L2Q9Y383 392 aaKnown RBP18.86■□□□□ 0.61
TCOF1-206ENST00000445265 PCCAP05165 728 aaPredicted RBP18.86■□□□□ 0.61
TCOF1-206ENST00000445265 MCM7P33993 719 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 ASIC1P78348 528 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 RESTQ13127 1097 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 TUBB2AQ13885 445 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 AKNAD1Q5T1N1 836 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 DTHD1Q6ZMT9 781 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 SPATA5Q8NB90 893 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 TUBB2BQ9BVA1 445 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 ZMYM6O95789 1325 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 ERBB3P21860 1342 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 UBXN1Q04323 297 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 ZFYVE27Q5T4F4 411 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 CRACR2BQ8N4Y2 399 aaPredicted RBP18.86■□□□□ 0.61
TCOF1-206ENST00000445265 DENND2AQ9ULE3 1009 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 DEPDC5O75140 1603 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 BICDL2A1A5D9 508 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 PPP2R3AQ06190 1150 aa18.86■□□□□ 0.61
TCOF1-206ENST00000445265 NDUFA8P51970 172 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 ZNF174Q15697 407 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 FAM107BQ9H098 131 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 PATL2C9JE40 543 aaKnown RBP18.85■□□□□ 0.61
TCOF1-206ENST00000445265 TRIM14Q14142 442 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 DDB1Q16531 1140 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 SLC4A8Q2Y0W8 1093 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 SEPT11Q9NVA2 429 aaKnown RBP18.85■□□□□ 0.61
TCOF1-206ENST00000445265 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 MAST3O60307 1309 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 CARD6Q9BX69 1037 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 ATG3Q9NT62 314 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 MCM9Q9NXL9 1143 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 CARMIL3Q8ND23 1372 aa18.85■□□□□ 0.61
TCOF1-206ENST00000445265 TSPOAP1O95153 1857 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 IGSF3O75054 1194 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 ADD1P35611 737 aaKnown RBP18.84■□□□□ 0.61
TCOF1-206ENST00000445265 ZBTB38Q8NAP3 1195 aaPredicted RBP18.84■□□□□ 0.61
TCOF1-206ENST00000445265 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 HMGB2P26583 209 aaKnown RBP18.84■□□□□ 0.61
TCOF1-206ENST00000445265 NAPAP54920 295 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 SPECC1Q5M775 1068 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 SETDB2Q96T68 719 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 C6orf50Q9HD87 102 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 V9GY48 417 aaPredicted RBP18.84■□□□□ 0.61
TCOF1-206ENST00000445265 CTDSPL2Q05D32 466 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 KIF5AQ12840 1032 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 FERMT2Q96AC1 680 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
TCOF1-206ENST00000445265 SYNRGQ9UMZ2 1314 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 USP32Q8NFA0 1604 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 TACC1O75410 805 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
TCOF1-206ENST00000445265 SPECC1LQ69YQ0 1117 aa18.83■□□□□ 0.61
TCOF1-206ENST00000445265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.83■□□□□ 0.61
TCOF1-206ENST00000445265 PUF60Q9UHX1 559 aaKnown RBP18.83■□□□□ 0.61
TCOF1-206ENST00000445265 PNOCQ13519 176 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 PDE6AP16499 860 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 CTSWP56202 376 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
TCOF1-206ENST00000445265 GUCA1BQ9UMX6 200 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 CLIC4Q9Y696 253 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 ENOX2Q16206 610 aaKnown RBP18.83■□□□□ 0.6
TCOF1-206ENST00000445265 CACTINQ8WUQ7 758 aaKnown RBP18.83■□□□□ 0.6
TCOF1-206ENST00000445265 ACSBG1Q96GR2 724 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 NYXQ9GZU5 481 aa18.83■□□□□ 0.6
TCOF1-206ENST00000445265 OVOS2A0A0J9YW53 1432 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 UBE3CQ15386 1083 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 OVOS2Q6IE36 1432 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 CCDC42Q96M95 316 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 ZNF215Q9UL58 517 aaPredicted RBP18.82■□□□□ 0.6
TCOF1-206ENST00000445265 KCNJ14Q9UNX9 436 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 PSDA5PKW4 1024 aaPredicted RBP18.82■□□□□ 0.6
TCOF1-206ENST00000445265 SLC39A14Q15043 492 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 TTC38Q5R3I4 469 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 NRKQ7Z2Y5 1582 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 IGKV5-2P06315 115 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 DNA2P51530 1060 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 ETF1P62495 437 aaKnown RBP18.82■□□□□ 0.6
TCOF1-206ENST00000445265 TOB2Q14106 344 aaPredicted RBP18.82■□□□□ 0.6
TCOF1-206ENST00000445265 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
TCOF1-206ENST00000445265 COL3A1P02461 1466 aaPredicted RBP18.82■□□□□ 0.6
TCOF1-206ENST00000445265 IVLP07476 585 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 GNA11P29992 359 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 PPP1R2P41236 205 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 CCT6AP40227 531 aaKnown RBP18.81■□□□□ 0.6
TCOF1-206ENST00000445265 C11orf57Q6ZUT1 292 aaPredicted RBP18.81■□□□□ 0.6
TCOF1-206ENST00000445265 TRERF1Q96PN7 1200 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 UBA5Q9GZZ9 404 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 USP42Q9H9J4 1324 aaKnown RBP18.81■□□□□ 0.6
TCOF1-206ENST00000445265 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 LINC00301Q8NCQ3 95 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 PUS3Q9BZE2 481 aaKnown RBP18.81■□□□□ 0.6
TCOF1-206ENST00000445265 CPS1P31327 1500 aa18.81■□□□□ 0.6
TCOF1-206ENST00000445265 TRIML1Q8N9V2 468 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms