RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 EPHB1P54762 984 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PSMC1P62191 440 aaKnown RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 BRD3Q15059 726 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZKSCAN8Q15776 578 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 DTHD1Q6ZMT9 781 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FAM196AQ6ZSG2 479 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 OXCT2Q9BYC2 517 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RRAGDQ9NQL2 400 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 EHBP1L1Q8N3D4 1523 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NR5A1Q13285 461 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NCOA2Q15596 1464 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NFE2Q16621 373 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RGL3Q3MIN7 710 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 HECW1Q76N89 1606 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 OR6P1Q8NGX9 317 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RHBDD1Q8TEB9 315 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ARPC5LQ9BPX5 153 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 IL21Q9HBE4 155 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 AVENQ9NQS1 362 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MCM8Q9UJA3 840 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 KCNMB2Q9Y691 235 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ROBO2Q9HCK4 1378 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SYNRGQ9UMZ2 1314 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MEN1O00255 615 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ADH1CP00326 375 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 KRT18P05783 430 aaKnown RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ADH1AP07327 375 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TPM2P07951 284 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 COL6A1P12109 1028 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CES1P23141 567 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 INPP5BP32019 993 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TPTE2Q6XPS3 522 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NYAP1Q6ZVC0 841 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SMAP1Q8IYB5 467 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 AGBL1Q96MI9 1066 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 APBA2Q99767 749 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FAM126AQ9BYI3 521 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ABI2Q9NYB9 513 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 POTEB3A0JP26 581 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FAM163BP0C2L3 166 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MYCLP1P12525 358 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PMLP29590 882 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FLT3P36888 993 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NFKB2Q00653 900 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MAP2K1Q02750 393 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SSRP1Q08945 709 aaKnown RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PPP2R5AQ15172 486 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TTF1Q15361 905 aaPredicted RBP7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 C21orf62-AS1Q17RA5 79 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SYCP2LQ5T4T6 812 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 POTEBQ6S5H4 581 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZNF280CQ8ND82 737 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 AIDAQ96BJ3 306 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LZTS1Q9Y250 596 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TLL2Q9Y6L7 1015 aa7.03□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZNF608Q9ULD9 1512 aaPredicted RBP7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ERCC6Q03468 1493 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 KCNQ2O43526 872 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 TSPAN6O43657 245 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 DIAPH1O60610 1272 aaKnown RBP7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 DDAH1O94760 285 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 GJB6O95452 261 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ATICP31939 592 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 STAT3P40763 770 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 SPATC1Q76KD6 591 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CCDC89Q8N998 374 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 NGDNQ8NEJ9 315 aaKnown RBP7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 VPS37AQ8NEZ2 397 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 MFSD3Q96ES6 412 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CAAP1Q9H8G2 361 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 DIS3Q9Y2L1 958 aaKnown RBP7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 UGGT2Q9NYU1 1516 aa7.02□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 A0A1W2PP55 124 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 HSP90AB1P08238 724 aaKnown RBP7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 EMP3P54852 163 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 PPP2R5EQ16537 467 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 PPP4R4Q6NUP7 873 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 THNSL2Q86YJ6 484 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 NIM1KQ8IY84 436 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CEP44Q9C0F1 390 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 TNKS2Q9H2K2 1166 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CXorf56Q9H5V9 222 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 RAI14Q9P0K7 980 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 EDN3P14138 238 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 POU3F3P20264 500 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 PLA2G4AP47712 749 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ZNF165P49910 485 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 MMRN1Q13201 1228 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 RAPGEF1Q13905 1077 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CDAN1Q8IWY9 1227 aa7.01□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ZSWIM2Q8NEG5 633 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms