RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.28
LTBR-202ENST00000440421 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
LTBR-202ENST00000440421 DDTLA6NHG4 134 aaPredicted RBP16.76■□□□□ 0.27
LTBR-202ENST00000440421 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
LTBR-202ENST00000440421 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
LTBR-202ENST00000440421 INPP5BP32019 993 aa16.76■□□□□ 0.27
LTBR-202ENST00000440421 ADGRA1Q86SQ6 560 aa16.76■□□□□ 0.27
LTBR-202ENST00000440421 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
LTBR-202ENST00000440421 OTUD5Q96G74 571 aa16.76■□□□□ 0.27
LTBR-202ENST00000440421 CRBNQ96SW2 442 aa16.76■□□□□ 0.27
LTBR-202ENST00000440421 SNCAIPQ9Y6H5 919 aa16.76■□□□□ 0.27
LTBR-202ENST00000440421 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 CAPN15O75808 1086 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 BAG3O95817 575 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 CYP7A1P22680 504 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 TEX11Q8IYF3 940 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
LTBR-202ENST00000440421 SPDYE5A6NIY4 337 aa16.74■□□□□ 0.27
LTBR-202ENST00000440421 MAP4K4O95819 1239 aaPredicted RBP16.74■□□□□ 0.27
LTBR-202ENST00000440421 SLURP2P0DP57 97 aa16.74■□□□□ 0.27
LTBR-202ENST00000440421 INHBEP58166 350 aa16.74■□□□□ 0.27
LTBR-202ENST00000440421 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
LTBR-202ENST00000440421 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
LTBR-202ENST00000440421 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
LTBR-202ENST00000440421 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
LTBR-202ENST00000440421 MAP3K12Q12852 859 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 ERO1BQ86YB8 467 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 MIGA1Q8NAN2 632 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 ZNF112Q9UJU3 913 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 LAMB1P07942 1786 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 ATRNL1Q5VV63 1379 aa16.73■□□□□ 0.27
LTBR-202ENST00000440421 GOLIM4O00461 696 aa16.72■□□□□ 0.27
LTBR-202ENST00000440421 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
LTBR-202ENST00000440421 PLCG2P16885 1265 aa16.72■□□□□ 0.27
LTBR-202ENST00000440421 PPP4CP60510 307 aa16.72■□□□□ 0.27
LTBR-202ENST00000440421 DYNLL1P63167 89 aaKnown RBP16.72■□□□□ 0.27
LTBR-202ENST00000440421 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
LTBR-202ENST00000440421 OSBPL5Q9H0X9 879 aaPredicted RBP16.72■□□□□ 0.27
LTBR-202ENST00000440421 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
LTBR-202ENST00000440421 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
LTBR-202ENST00000440421 CCL15-CCL14A0A0B4J2E2 113 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
LTBR-202ENST00000440421 FAM196BA6NMK8 535 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 IGSF3O75054 1194 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 ALDH1A1P00352 501 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 GTF2A2P52657 109 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.27
LTBR-202ENST00000440421 CCL15Q16663 113 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
LTBR-202ENST00000440421 TGFBRAP1Q8WUH2 860 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
LTBR-202ENST00000440421 PTPN18Q99952 460 aa16.71■□□□□ 0.27
LTBR-202ENST00000440421 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
LTBR-202ENST00000440421 IRF6O14896 467 aa16.7■□□□□ 0.26
LTBR-202ENST00000440421 PPIL2Q13356 520 aa16.7■□□□□ 0.26
LTBR-202ENST00000440421 DGKZQ13574 1117 aa16.7■□□□□ 0.26
LTBR-202ENST00000440421 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
LTBR-202ENST00000440421 ZNF296Q8WUU4 475 aaPredicted RBP16.7■□□□□ 0.26
LTBR-202ENST00000440421 GPR25O00155 361 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 ATP5JP18859 108 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 PPATQ06203 517 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 NOL9Q5SY16 702 aaKnown RBP16.69■□□□□ 0.26
LTBR-202ENST00000440421 SLC9C2Q5TAH2 1124 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 MCOLN1Q9GZU1 580 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.69■□□□□ 0.26
LTBR-202ENST00000440421 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 FLT1P17948 1338 aa16.69■□□□□ 0.26
LTBR-202ENST00000440421 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
LTBR-202ENST00000440421 CETPP11597 493 aa16.68■□□□□ 0.26
LTBR-202ENST00000440421 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
LTBR-202ENST00000440421 SLC4A8Q2Y0W8 1093 aa16.68■□□□□ 0.26
LTBR-202ENST00000440421 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
LTBR-202ENST00000440421 CFHR5Q9BXR6 569 aa16.68■□□□□ 0.26
LTBR-202ENST00000440421 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
LTBR-202ENST00000440421 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
LTBR-202ENST00000440421 TBC1D12O60347 775 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 PDE6AP16499 860 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 USP5P45974 858 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 CRHR2Q13324 411 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 ABHD8Q96I13 439 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 HAUS7Q99871 368 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 PICK1Q9NRD5 415 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.67■□□□□ 0.26
LTBR-202ENST00000440421 PALD1Q9ULE6 856 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 FOCADQ5VW36 1801 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 ZNF532Q9HCE3 1301 aa16.67■□□□□ 0.26
LTBR-202ENST00000440421 MAGEB6P1A0A0J9YX57 407 aa16.66■□□□□ 0.26
LTBR-202ENST00000440421 FKTNO75072 461 aa16.66■□□□□ 0.26
LTBR-202ENST00000440421 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
LTBR-202ENST00000440421 ECHDC1Q9NTX5 307 aa16.66■□□□□ 0.26
LTBR-202ENST00000440421 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
LTBR-202ENST00000440421 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
LTBR-202ENST00000440421 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
LTBR-202ENST00000440421 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms