RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LDHCP07864 332 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 GSTO1P78417 241 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 SH3BP5LQ7L8J4 393 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 SCYL3Q8IZE3 742 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 SPATA5Q8NB90 893 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 ARHGAP39Q9C0H5 1083 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 CPA4Q9UI42 421 aa25.59■■□□□ 1.69
CPNE1-219ENST00000440240 ATRNL1Q5VV63 1379 aa25.58■■□□□ 1.69
CPNE1-219ENST00000440240 PNMA6EA0A0J9YXQ4 647 aa25.58■■□□□ 1.69
CPNE1-219ENST00000440240 MAP4K4O95819 1239 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-219ENST00000440240 EN2P19622 333 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-219ENST00000440240 HOXD10P28358 340 aa25.58■■□□□ 1.69
CPNE1-219ENST00000440240 MOGSQ13724 837 aa25.58■■□□□ 1.69
CPNE1-219ENST00000440240 FASTKD5Q7L8L6 764 aaKnown RBP25.58■■□□□ 1.69
CPNE1-219ENST00000440240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-219ENST00000440240 ZHX2Q9Y6X8 837 aa25.58■■□□□ 1.69
CPNE1-219ENST00000440240 MYH2Q9UKX2 1941 aa25.58■■□□□ 1.69
CPNE1-219ENST00000440240 DDTLA6NHG4 134 aaPredicted RBP25.57■■□□□ 1.68
CPNE1-219ENST00000440240 CTNND1O60716 968 aaKnown RBP25.57■■□□□ 1.68
CPNE1-219ENST00000440240 NPM3O75607 178 aaKnown RBP25.57■■□□□ 1.68
CPNE1-219ENST00000440240 ZKSCAN2Q63HK3 967 aa25.57■■□□□ 1.68
CPNE1-219ENST00000440240 TNNQ9UQP3 1299 aa25.57■■□□□ 1.68
CPNE1-219ENST00000440240 RFX7Q2KHR2 1363 aa25.56■■□□□ 1.68
CPNE1-219ENST00000440240 PTPRAP18433 802 aa25.56■■□□□ 1.68
CPNE1-219ENST00000440240 ARID4AP29374 1257 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-219ENST00000440240 PSMC4P43686 418 aa25.56■■□□□ 1.68
CPNE1-219ENST00000440240 PICALMQ13492 652 aa25.56■■□□□ 1.68
CPNE1-219ENST00000440240 SLC4A8Q2Y0W8 1093 aa25.56■■□□□ 1.68
CPNE1-219ENST00000440240 PARK7Q99497 189 aaKnown RBP25.56■■□□□ 1.68
CPNE1-219ENST00000440240 DDX4Q9NQI0 724 aaKnown RBP25.56■■□□□ 1.68
CPNE1-219ENST00000440240 MKI67P46013 3256 aaKnown RBP25.56■■□□□ 1.68
CPNE1-219ENST00000440240 UQCRFS1P1P0C7P4 283 aa25.55■■□□□ 1.68
CPNE1-219ENST00000440240 RHBDL3P58872 404 aa25.55■■□□□ 1.68
CPNE1-219ENST00000440240 GPAT2Q6NUI2 795 aa25.55■■□□□ 1.68
CPNE1-219ENST00000440240 NSUN4Q96CB9 384 aaKnown RBP25.55■■□□□ 1.68
CPNE1-219ENST00000440240 TBC1D12O60347 775 aa25.54■■□□□ 1.68
CPNE1-219ENST00000440240 TBC1D9Q6ZT07 1266 aa25.54■■□□□ 1.68
CPNE1-219ENST00000440240 TMEM57Q8N5G2 664 aa25.54■■□□□ 1.68
CPNE1-219ENST00000440240 ZNF384Q8TF68 577 aa25.54■■□□□ 1.68
CPNE1-219ENST00000440240 RAI14Q9P0K7 980 aa25.54■■□□□ 1.68
CPNE1-219ENST00000440240 AFG3L2Q9Y4W6 797 aa25.54■■□□□ 1.68
CPNE1-219ENST00000440240 BRCA2P51587 3418 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 A0A0G2JLL6 359 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-219ENST00000440240 FMNL1O95466 1100 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-219ENST00000440240 PI16Q6UXB8 463 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 PRRT2Q7Z6L0 340 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-219ENST00000440240 SH3TC2Q8TF17 1288 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 GCC1Q96CN9 775 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 TRIM47Q96LD4 638 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 GPR108Q9NPR9 543 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 LRP2BPQ9P2M1 347 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 SRRDQ9UH36 339 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 ADGRA2Q96PE1 1338 aa25.53■■□□□ 1.68
CPNE1-219ENST00000440240 RBBP6Q7Z6E9 1792 aaKnown RBP25.51■■□□□ 1.67
CPNE1-219ENST00000440240 ECM2O94769 699 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-219ENST00000440240 CYP2C8P10632 490 aa25.51■■□□□ 1.67
CPNE1-219ENST00000440240 MCAMP43121 646 aa25.51■■□□□ 1.67
CPNE1-219ENST00000440240 ATP8B2P98198 1209 aa25.51■■□□□ 1.67
CPNE1-219ENST00000440240 POLA2Q14181 598 aa25.51■■□□□ 1.67
CPNE1-219ENST00000440240 CCDC158Q5M9N0 1113 aa25.51■■□□□ 1.67
CPNE1-219ENST00000440240 SLC45A1Q9Y2W3 748 aa25.51■■□□□ 1.67
CPNE1-219ENST00000440240 BCRP11274 1271 aa25.5■■□□□ 1.67
CPNE1-219ENST00000440240 OSBPP22059 807 aa25.5■■□□□ 1.67
CPNE1-219ENST00000440240 CTGFP29279 349 aa25.5■■□□□ 1.67
CPNE1-219ENST00000440240 OS9Q13438 667 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-219ENST00000440240 GADL1Q6ZQY3 521 aa25.5■■□□□ 1.67
CPNE1-219ENST00000440240 RAET1EQ8TD07 263 aa25.5■■□□□ 1.67
CPNE1-219ENST00000440240 SSH3Q8TE77 659 aa25.5■■□□□ 1.67
CPNE1-219ENST00000440240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.5■■□□□ 1.679e-8■■■■■ 116.8
CPNE1-219ENST00000440240 MYCP01106 439 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-219ENST00000440240 NOL10Q9BSC4 688 aaKnown RBP25.49■■□□□ 1.67
CPNE1-219ENST00000440240 SLURP2P0DP57 97 aa25.48■■□□□ 1.67
CPNE1-219ENST00000440240 FCGRTP55899 365 aa25.48■■□□□ 1.67
CPNE1-219ENST00000440240 HNRNPUQ00839 825 aaKnown RBP eCLIP25.48■■□□□ 1.67
CPNE1-219ENST00000440240 TNNI3KQ59H18 835 aa25.48■■□□□ 1.67
CPNE1-219ENST00000440240 TTC39AQ5SRH9 613 aa25.48■■□□□ 1.67
CPNE1-219ENST00000440240 FTSJ3Q8IY81 847 aaKnown RBP25.48■■□□□ 1.67
CPNE1-219ENST00000440240 OSBPL5Q9H0X9 879 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-219ENST00000440240 FPGT-TNNI3KV9GXZ4 949 aa25.48■■□□□ 1.67
CPNE1-219ENST00000440240 DOCK2Q92608 1830 aa25.48■■□□□ 1.67
CPNE1-219ENST00000440240 MYPNQ86TC9 1320 aa25.47■■□□□ 1.67
CPNE1-219ENST00000440240 TRIM75PA6NK02 468 aa25.47■■□□□ 1.67
CPNE1-219ENST00000440240 SURF6O75683 361 aaKnown RBP25.47■■□□□ 1.67
CPNE1-219ENST00000440240 BAG3O95817 575 aa25.47■■□□□ 1.67
CPNE1-219ENST00000440240 GRK4P32298 578 aa25.47■■□□□ 1.67
CPNE1-219ENST00000440240 TEX11Q8IYF3 940 aa25.47■■□□□ 1.67
CPNE1-219ENST00000440240 PCDH10Q9P2E7 1040 aa25.47■■□□□ 1.67
CPNE1-219ENST00000440240 IGSF3O75054 1194 aa25.46■■□□□ 1.67
CPNE1-219ENST00000440240 ZNF512BQ96KM6 892 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-219ENST00000440240 TBC1D2Q9BYX2 928 aa25.46■■□□□ 1.67
CPNE1-219ENST00000440240 PLCG2P16885 1265 aa25.45■■□□□ 1.66
CPNE1-219ENST00000440240 NAA16Q6N069 864 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-219ENST00000440240 SMCR8Q8TEV9 937 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-219ENST00000440240 DBNDD2Q9BQY9 259 aa25.45■■□□□ 1.66
CPNE1-219ENST00000440240 DHX36Q9H2U1 1008 aaKnown RBP25.45■■□□□ 1.66
CPNE1-219ENST00000440240 SNRKQ9NRH2 765 aa25.45■■□□□ 1.66
CPNE1-219ENST00000440240 HERC5Q9UII4 1024 aaKnown RBP25.45■■□□□ 1.66
CPNE1-219ENST00000440240 COL2A1P02458 1487 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-219ENST00000440240 ZBTB7BO15156 539 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-219ENST00000440240 PI4KBQ9UBF8 816 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms