RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CLMNQ96JQ2 1002 aa21.5■■□□□ 1.03
CCDC188-201ENST00000439765 RPAP1Q9BWH6 1393 aaPredicted RBP21.49■■□□□ 1.03
CCDC188-201ENST00000439765 MANSC4A6NHS7 340 aaPredicted RBP21.49■■□□□ 1.03
CCDC188-201ENST00000439765 CCDC85CA6NKD9 419 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 LDHCP07864 332 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 ATP5JP18859 108 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 ADGRA1Q86SQ6 560 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 FAM83AQ86UY5 434 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 ANKRD13AQ8IZ07 590 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 WNK4Q96J92 1243 aa21.49■■□□□ 1.03
CCDC188-201ENST00000439765 GPR75-ASB3A0A0A6YYF3 556 aa21.48■■□□□ 1.03
CCDC188-201ENST00000439765 INHBEP58166 350 aa21.48■■□□□ 1.03
CCDC188-201ENST00000439765 GCC1Q96CN9 775 aa21.48■■□□□ 1.03
CCDC188-201ENST00000439765 GPATCH3Q96I76 525 aa21.48■■□□□ 1.03
CCDC188-201ENST00000439765 ECHDC1Q9NTX5 307 aa21.48■■□□□ 1.03
CCDC188-201ENST00000439765 PICALMQ13492 652 aa21.47■■□□□ 1.03
CCDC188-201ENST00000439765 ANKRD45Q5TZF3 282 aa21.47■■□□□ 1.03
CCDC188-201ENST00000439765 CTU1Q7Z7A3 348 aaKnown RBP21.47■■□□□ 1.03
CCDC188-201ENST00000439765 MAGEB6Q8N7X4 407 aa21.47■■□□□ 1.03
CCDC188-201ENST00000439765 OTUD7AQ8TE49 926 aaPredicted RBP21.47■■□□□ 1.03
CCDC188-201ENST00000439765 NOL10Q9BSC4 688 aaKnown RBP21.47■■□□□ 1.03
CCDC188-201ENST00000439765 AATFQ9NY61 560 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCDC188-201ENST00000439765 ZBTB47Q9UFB7 747 aaPredicted RBP21.47■■□□□ 1.03
CCDC188-201ENST00000439765 FAM198AQ9UFP1 575 aa21.47■■□□□ 1.03
CCDC188-201ENST00000439765 TBC1D8O95759 1140 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 ALDH1A1P00352 501 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 RGS3P49796 1198 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 RHBDL3P58872 404 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 MAP3K12Q12852 859 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 TTF1Q15361 905 aaPredicted RBP21.46■■□□□ 1.03
CCDC188-201ENST00000439765 HAUS7Q99871 368 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 PAG1Q9NWQ8 432 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 NAV1Q8NEY1 1877 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 PDE4DIPQ5VU43 2346 aa21.46■■□□□ 1.03
CCDC188-201ENST00000439765 WDHD1O75717 1129 aaPredicted RBP21.45■■□□□ 1.03
CCDC188-201ENST00000439765 CYP7A1P22680 504 aa21.45■■□□□ 1.03
CCDC188-201ENST00000439765 ZNF296Q8WUU4 475 aaPredicted RBP21.45■■□□□ 1.03
CCDC188-201ENST00000439765 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.03
CCDC188-201ENST00000439765 MYH1P12882 1939 aa21.45■■□□□ 1.02
CCDC188-201ENST00000439765 GPR25O00155 361 aa21.45■■□□□ 1.02
CCDC188-201ENST00000439765 RGS19P49795 217 aa21.45■■□□□ 1.02
CCDC188-201ENST00000439765 ZFPM1Q8IX07 1006 aa21.45■■□□□ 1.02
CCDC188-201ENST00000439765 FAM151AQ8WW52 585 aa21.45■■□□□ 1.02
CCDC188-201ENST00000439765 IDI2Q9BXS1 227 aa21.45■■□□□ 1.02
CCDC188-201ENST00000439765 DDX4Q9NQI0 724 aaKnown RBP21.45■■□□□ 1.02
CCDC188-201ENST00000439765 CENPQQ7L2Z9 268 aaPredicted RBP21.44■■□□□ 1.02
CCDC188-201ENST00000439765 IFNL1Q8IU54 200 aa21.44■■□□□ 1.02
CCDC188-201ENST00000439765 SMC5Q8IY18 1101 aa21.44■■□□□ 1.02
CCDC188-201ENST00000439765 MIGA1Q8NAN2 632 aa21.44■■□□□ 1.02
CCDC188-201ENST00000439765 SH3RF3Q8TEJ3 882 aaPredicted RBP21.44■■□□□ 1.02
CCDC188-201ENST00000439765 SIPA1L1O43166 1804 aa21.43■■□□□ 1.02
CCDC188-201ENST00000439765 BAG3O95817 575 aa21.43■■□□□ 1.02
CCDC188-201ENST00000439765 GJA5P36382 358 aa21.43■■□□□ 1.02
CCDC188-201ENST00000439765 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.43■■□□□ 1.02
CCDC188-201ENST00000439765 TEX11Q8IYF3 940 aa21.43■■□□□ 1.02
CCDC188-201ENST00000439765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCDC188-201ENST00000439765 DDX60LQ5H9U9 1706 aaKnown RBP21.42■■□□□ 1.02
CCDC188-201ENST00000439765 IGSF3O75054 1194 aa21.42■■□□□ 1.02
CCDC188-201ENST00000439765 PDE6AP16499 860 aa21.42■■□□□ 1.02
CCDC188-201ENST00000439765 MX1P20591 662 aa21.42■■□□□ 1.02
CCDC188-201ENST00000439765 SLC9C2Q5TAH2 1124 aa21.42■■□□□ 1.02
CCDC188-201ENST00000439765 ZSCAN29Q8IWY8 852 aaPredicted RBP21.42■■□□□ 1.02
CCDC188-201ENST00000439765 LNPKQ9C0E8 428 aa21.42■■□□□ 1.02
CCDC188-201ENST00000439765 TESPA1A2RU30 521 aaPredicted RBP21.41■■□□□ 1.02
CCDC188-201ENST00000439765 IGF2BP3O00425 579 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC188-201ENST00000439765 ENTPD3O75355 529 aa21.41■■□□□ 1.02
CCDC188-201ENST00000439765 DYNLL1P63167 89 aaKnown RBP21.41■■□□□ 1.02
CCDC188-201ENST00000439765 PKN2Q16513 984 aaKnown RBP21.41■■□□□ 1.02
CCDC188-201ENST00000439765 TTC41PQ6P2S7 1318 aa21.41■■□□□ 1.02
CCDC188-201ENST00000439765 ATAD5Q96QE3 1844 aa21.41■■□□□ 1.02
CCDC188-201ENST00000439765 PLCG2P16885 1265 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 MAP3K9P80192 1104 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 MIGA2Q7L4E1 593 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 OPTNQ96CV9 577 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 R3HDMLQ9H3Y0 253 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 SALL3Q9BXA9 1300 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 ZNF532Q9HCE3 1301 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 DOCK1Q14185 1865 aa21.4■■□□□ 1.02
CCDC188-201ENST00000439765 VGLL4Q14135 290 aa21.39■■□□□ 1.02
CCDC188-201ENST00000439765 SLFNL1Q499Z3 407 aa21.39■■□□□ 1.02
CCDC188-201ENST00000439765 SH3BP5LQ7L8J4 393 aa21.39■■□□□ 1.02
CCDC188-201ENST00000439765 PI4K2BQ8TCG2 481 aa21.39■■□□□ 1.02
CCDC188-201ENST00000439765 HOOK2Q96ED9 719 aa21.39■■□□□ 1.02
CCDC188-201ENST00000439765 ELP3Q9H9T3 547 aa21.39■■□□□ 1.02
CCDC188-201ENST00000439765 DDTLA6NHG4 134 aaPredicted RBP21.39■■□□□ 1.01
CCDC188-201ENST00000439765 FKTNO75072 461 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
CCDC188-201ENST00000439765 CHGBP05060 677 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 PPP4CP60510 307 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 DCAF15Q66K64 600 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 WRNIP1Q96S55 665 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.39■■□□□ 1.01
CCDC188-201ENST00000439765 OSBPL5Q9H0X9 879 aaPredicted RBP21.39■■□□□ 1.01
CCDC188-201ENST00000439765 CSADQ9Y600 493 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 ATRNL1Q5VV63 1379 aa21.39■■□□□ 1.01
CCDC188-201ENST00000439765 COL2A1P02458 1487 aaPredicted RBP21.38■■□□□ 1.01
CCDC188-201ENST00000439765 BAZ2AQ9UIF9 1905 aaKnown RBP21.38■■□□□ 1.01
CCDC188-201ENST00000439765 FLT1P17948 1338 aa21.38■■□□□ 1.01
CCDC188-201ENST00000439765 TCRBV5S4A2TA0A5A2 114 aa21.38■■□□□ 1.01
CCDC188-201ENST00000439765 ERC2O15083 957 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms