RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 RESP18Q5W5W9 173 aa17.74■□□□□ 0.43
APP-208ENST00000439274 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
APP-208ENST00000439274 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.74■□□□□ 0.43
APP-208ENST00000439274 SLC26A6Q9BXS9 759 aa17.74■□□□□ 0.43
APP-208ENST00000439274 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
APP-208ENST00000439274 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
APP-208ENST00000439274 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
APP-208ENST00000439274 KIF2AO00139 706 aaPredicted RBP17.73■□□□□ 0.43
APP-208ENST00000439274 SNAP23O00161 211 aa17.73■□□□□ 0.43
APP-208ENST00000439274 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
APP-208ENST00000439274 MYL5Q02045 173 aa17.73■□□□□ 0.43
APP-208ENST00000439274 UBE3CQ15386 1083 aa17.73■□□□□ 0.43
APP-208ENST00000439274 CPLX2Q6PUV4 134 aaKnown RBP17.73■□□□□ 0.43
APP-208ENST00000439274 ATRNO75882 1429 aa17.73■□□□□ 0.43
APP-208ENST00000439274 PDE8BO95263 885 aa17.73■□□□□ 0.43
APP-208ENST00000439274 TTF1Q15361 905 aaPredicted RBP17.73■□□□□ 0.43
APP-208ENST00000439274 CFAP100Q494V2 611 aa17.73■□□□□ 0.43
APP-208ENST00000439274 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
APP-208ENST00000439274 AIDAQ96BJ3 306 aa17.73■□□□□ 0.43
APP-208ENST00000439274 STRBPQ96SI9 672 aaKnown RBP17.73■□□□□ 0.43
APP-208ENST00000439274 EPB41L4AQ9HCS5 686 aaPredicted RBP17.73■□□□□ 0.43
APP-208ENST00000439274 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
APP-208ENST00000439274 ECM29Q5VYK3 1845 aa17.73■□□□□ 0.43
APP-208ENST00000439274 GUCY1A2P33402 732 aa17.72■□□□□ 0.43
APP-208ENST00000439274 TRIM29Q14134 588 aa17.72■□□□□ 0.43
APP-208ENST00000439274 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
APP-208ENST00000439274 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
APP-208ENST00000439274 PDE4BQ07343 736 aa17.72■□□□□ 0.43
APP-208ENST00000439274 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
APP-208ENST00000439274 STK11IPQ8N1F8 1099 aa17.72■□□□□ 0.43
APP-208ENST00000439274 L2HGDHQ9H9P8 463 aa17.72■□□□□ 0.43
APP-208ENST00000439274 FANCLQ9NW38 375 aa17.72■□□□□ 0.43
APP-208ENST00000439274 ZSWIM5Q9P217 1185 aa17.72■□□□□ 0.43
APP-208ENST00000439274 TRMT112Q9UI30 125 aaKnown RBP17.72■□□□□ 0.43
APP-208ENST00000439274 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
APP-208ENST00000439274 PCDHA5Q9Y5H7 936 aa17.72■□□□□ 0.43
APP-208ENST00000439274 BMP6P22004 513 aa17.71■□□□□ 0.43
APP-208ENST00000439274 GRIN1Q05586 938 aa17.71■□□□□ 0.43
APP-208ENST00000439274 CNNM3Q8NE01 707 aa17.71■□□□□ 0.43
APP-208ENST00000439274 TMEM87BQ96K49 555 aa17.71■□□□□ 0.43
APP-208ENST00000439274 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
APP-208ENST00000439274 KCNH3Q9ULD8 1083 aa17.71■□□□□ 0.43
APP-208ENST00000439274 IFIT3O14879 490 aaKnown RBP17.71■□□□□ 0.43
APP-208ENST00000439274 STARD3NLO95772 234 aa17.71■□□□□ 0.43
APP-208ENST00000439274 EVA1CP58658 441 aa17.71■□□□□ 0.43
APP-208ENST00000439274 KRBA2Q6ZNG9 492 aa17.71■□□□□ 0.43
APP-208ENST00000439274 ZKSCAN3Q9BRR0 538 aa17.71■□□□□ 0.43
APP-208ENST00000439274 KCNJ14Q9UNX9 436 aa17.71■□□□□ 0.43
APP-208ENST00000439274 PLCH1Q4KWH8 1693 aa17.7■□□□□ 0.42
APP-208ENST00000439274 FAM237AA0A1B0GTK4 181 aa17.7■□□□□ 0.42
APP-208ENST00000439274 BTBD18B2RXH4 712 aa17.7■□□□□ 0.42
APP-208ENST00000439274 MBD4O95243 580 aa17.7■□□□□ 0.42
APP-208ENST00000439274 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
APP-208ENST00000439274 MAGEB6Q8N7X4 407 aa17.7■□□□□ 0.42
APP-208ENST00000439274 ARMT1Q9H993 441 aa17.7■□□□□ 0.42
APP-208ENST00000439274 SLC12A7Q9Y666 1083 aa17.7■□□□□ 0.42
APP-208ENST00000439274 NRDCO43847 1150 aa17.7■□□□□ 0.42
APP-208ENST00000439274 CUTAO60888 179 aa17.7■□□□□ 0.42
APP-208ENST00000439274 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
APP-208ENST00000439274 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
APP-208ENST00000439274 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
APP-208ENST00000439274 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
APP-208ENST00000439274 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
APP-208ENST00000439274 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
APP-208ENST00000439274 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
APP-208ENST00000439274 ZNF446Q9NWS9 450 aa17.7■□□□□ 0.42
APP-208ENST00000439274 DNAI1Q9UI46 699 aa17.7■□□□□ 0.42
APP-208ENST00000439274 FANCGO15287 622 aa17.69■□□□□ 0.42
APP-208ENST00000439274 PRKAB2O43741 272 aa17.69■□□□□ 0.42
APP-208ENST00000439274 KCNJ6P48051 423 aa17.69■□□□□ 0.42
APP-208ENST00000439274 SSRP1Q08945 709 aaKnown RBP17.69■□□□□ 0.42
APP-208ENST00000439274 VSTM4Q8IW00 320 aa17.69■□□□□ 0.42
APP-208ENST00000439274 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
APP-208ENST00000439274 NAPBQ9H115 298 aa17.69■□□□□ 0.42
APP-208ENST00000439274 INTS13Q9NVM9 706 aa17.69■□□□□ 0.42
APP-208ENST00000439274 TOB1P50616 345 aaPredicted RBP17.69■□□□□ 0.42
APP-208ENST00000439274 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
APP-208ENST00000439274 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
APP-208ENST00000439274 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
APP-208ENST00000439274 NOSTRINQ8IVI9 506 aa17.68■□□□□ 0.42
APP-208ENST00000439274 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
APP-208ENST00000439274 ZBTB1Q9Y2K1 713 aa17.68■□□□□ 0.42
APP-208ENST00000439274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.68■□□□□ 0.428e-12■□□□□ 8.1
APP-208ENST00000439274 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
APP-208ENST00000439274 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
APP-208ENST00000439274 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
APP-208ENST00000439274 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
APP-208ENST00000439274 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
APP-208ENST00000439274 KRI1Q8N9T8 703 aaKnown RBP17.68■□□□□ 0.42
APP-208ENST00000439274 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
APP-208ENST00000439274 RGS22Q8NE09 1264 aa17.68■□□□□ 0.42
APP-208ENST00000439274 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
APP-208ENST00000439274 WNK3Q9BYP7 1800 aa17.68■□□□□ 0.42
APP-208ENST00000439274 NRAPQ86VF7 1730 aa17.68■□□□□ 0.42
APP-208ENST00000439274 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
APP-208ENST00000439274 ETF1P62495 437 aaKnown RBP17.67■□□□□ 0.42
APP-208ENST00000439274 RASGRF1Q13972 1273 aa17.67■□□□□ 0.42
APP-208ENST00000439274 DIS3L2Q8IYB7 885 aaKnown RBP17.67■□□□□ 0.42
APP-208ENST00000439274 GRAMD1CQ8IYS0 662 aa17.67■□□□□ 0.42
APP-208ENST00000439274 TMX1Q9H3N1 280 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms