RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DCTPP1Q9H773 170 aa30.13■■■□□ 2.41
RAPGEF1-206ENST00000438647 MAP3K12Q12852 859 aa30.12■■■□□ 2.41
RAPGEF1-206ENST00000438647 ZFPM1Q8IX07 1006 aa30.12■■■□□ 2.41
RAPGEF1-206ENST00000438647 DDX4Q9NQI0 724 aaKnown RBP30.12■■■□□ 2.41
RAPGEF1-206ENST00000438647 PPP4CP60510 307 aa30.11■■■□□ 2.41
RAPGEF1-206ENST00000438647 TEX11Q8IYF3 940 aa30.11■■■□□ 2.41
RAPGEF1-206ENST00000438647 CRBNQ96SW2 442 aa30.11■■■□□ 2.41
RAPGEF1-206ENST00000438647 CERS3Q8IU89 383 aa30.1■■■□□ 2.41
RAPGEF1-206ENST00000438647 AATFQ9NY61 560 aaKnown RBP eCLIP30.1■■■□□ 2.41
RAPGEF1-206ENST00000438647 PCDHB15Q9Y5E8 787 aa30.1■■■□□ 2.41
RAPGEF1-206ENST00000438647 NDUFB9Q9Y6M9 179 aa30.1■■■□□ 2.41
RAPGEF1-206ENST00000438647 ALDH1A1P00352 501 aa30.09■■■□□ 2.41
RAPGEF1-206ENST00000438647 ANTXR1Q9H6X2 564 aa30.09■■■□□ 2.41
RAPGEF1-206ENST00000438647 SPDYE5A6NIY4 337 aa30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 CYP7A1P22680 504 aa30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 GJA5P36382 358 aa30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 ERO1BQ86YB8 467 aa30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 ZKSCAN4Q969J2 545 aaPredicted RBP30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 ZNF112Q9UJU3 913 aa30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 SNCAIPQ9Y6H5 919 aa30.08■■■□□ 2.41
RAPGEF1-206ENST00000438647 ATRNL1Q5VV63 1379 aa30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 AAMPQ13685 434 aa30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 SH3BP5LQ7L8J4 393 aa30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 MAGEB6Q8N7X4 407 aa30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 SH3RF3Q8TEJ3 882 aaPredicted RBP30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 DNAJC2Q99543 621 aaKnown RBP30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 OSBPL5Q9H0X9 879 aaPredicted RBP30.07■■■□□ 2.4
RAPGEF1-206ENST00000438647 COL2A1P02458 1487 aaPredicted RBP30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 DOCK2Q92608 1830 aa30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 DDTLA6NHG4 134 aaPredicted RBP30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 ATP5JP18859 108 aa30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 OTUD7BQ6GQQ9 843 aa30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 ADGRA1Q86SQ6 560 aa30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 OTUD5Q96G74 571 aa30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 MYO5AQ9Y4I1 1855 aaKnown RBP30.06■■■□□ 2.4
RAPGEF1-206ENST00000438647 SMARCA5O60264 1052 aaPredicted RBP30.05■■■□□ 2.4
RAPGEF1-206ENST00000438647 INPP5BP32019 993 aa30.05■■■□□ 2.4
RAPGEF1-206ENST00000438647 IFNL1Q8IU54 200 aa30.05■■■□□ 2.4
RAPGEF1-206ENST00000438647 LAMB1P07942 1786 aa30.05■■■□□ 2.4
RAPGEF1-206ENST00000438647 GOLIM4O00461 696 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 GTF2A2P52657 109 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 MAP3K10Q02779 954 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 IFFO2Q5TF58 517 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 CNKSR2Q8WXI2 1034 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 CFHR5Q9BXR6 569 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 BOLA2Q9H3K6 86 aa30.04■■■□□ 2.4
RAPGEF1-206ENST00000438647 TESPA1A2RU30 521 aaPredicted RBP30.03■■■□□ 2.4
RAPGEF1-206ENST00000438647 NOL9Q5SY16 702 aaKnown RBP30.03■■■□□ 2.4
RAPGEF1-206ENST00000438647 GPATCH3Q96I76 525 aa30.03■■■□□ 2.4
RAPGEF1-206ENST00000438647 PPATQ06203 517 aa30.02■■■□□ 2.4
RAPGEF1-206ENST00000438647 PPIL2Q13356 520 aa30.02■■■□□ 2.4
RAPGEF1-206ENST00000438647 TGFBRAP1Q8WUH2 860 aa30.02■■■□□ 2.4
RAPGEF1-206ENST00000438647 DHX36Q9H2U1 1008 aaKnown RBP30.02■■■□□ 2.4
RAPGEF1-206ENST00000438647 PAG1Q9NWQ8 432 aa30.02■■■□□ 2.4
RAPGEF1-206ENST00000438647 TBC1D12O60347 775 aa30.01■■■□□ 2.39
RAPGEF1-206ENST00000438647 TBC1D8O95759 1140 aa30.01■■■□□ 2.39
RAPGEF1-206ENST00000438647 MS4A4AQ96JQ5 239 aa30.01■■■□□ 2.39
RAPGEF1-206ENST00000438647 HAUS7Q99871 368 aa30.01■■■□□ 2.39
RAPGEF1-206ENST00000438647 IGF2BP3O00425 579 aaKnown RBP eCLIP30■■■□□ 2.39
RAPGEF1-206ENST00000438647 NOM1Q5C9Z4 860 aaKnown RBP30■■■□□ 2.39
RAPGEF1-206ENST00000438647 SLC9C2Q5TAH2 1124 aa30■■■□□ 2.39
RAPGEF1-206ENST00000438647 MIGA1Q8NAN2 632 aa30■■■□□ 2.39
RAPGEF1-206ENST00000438647 ECHDC1Q9NTX5 307 aa30■■■□□ 2.39
RAPGEF1-206ENST00000438647 CASP8AP2Q9UKL3 1982 aa30■■■□□ 2.39
RAPGEF1-206ENST00000438647 FLT1P17948 1338 aa29.99■■■□□ 2.39
RAPGEF1-206ENST00000438647 CCL15-CCL14A0A0B4J2E2 113 aa29.99■■■□□ 2.39
RAPGEF1-206ENST00000438647 PHF20L1A8MW92 1017 aa29.99■■■□□ 2.39
RAPGEF1-206ENST00000438647 SNAPC2Q13487 334 aa29.99■■■□□ 2.39
RAPGEF1-206ENST00000438647 CCL15Q16663 113 aa29.99■■■□□ 2.39
RAPGEF1-206ENST00000438647 IRF6O14896 467 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 CETPP11597 493 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 PDE6AP16499 860 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 DYNLL1P63167 89 aaKnown RBP29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 MAPKAPK5Q8IW41 473 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 SCYL3Q8IZE3 742 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 PICK1Q9NRD5 415 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 PI4KBQ9UBF8 816 aa29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 HERC5Q9UII4 1024 aaKnown RBP29.98■■■□□ 2.39
RAPGEF1-206ENST00000438647 CTNND1O60716 968 aaKnown RBP29.97■■■□□ 2.39
RAPGEF1-206ENST00000438647 ZBTB47Q9UFB7 747 aaPredicted RBP29.97■■■□□ 2.39
RAPGEF1-206ENST00000438647 HDAC1Q13547 482 aaPredicted RBP29.96■■■□□ 2.39
RAPGEF1-206ENST00000438647 BRI3BPQ8WY22 251 aa29.96■■■□□ 2.39
RAPGEF1-206ENST00000438647 EDC3Q96F86 508 aaKnown RBP29.96■■■□□ 2.39
RAPGEF1-206ENST00000438647 PTPN18Q99952 460 aa29.96■■■□□ 2.39
RAPGEF1-206ENST00000438647 GPR25O00155 361 aa29.95■■■□□ 2.39
RAPGEF1-206ENST00000438647 USP5P45974 858 aa29.95■■■□□ 2.39
RAPGEF1-206ENST00000438647 ZNF532Q9HCE3 1301 aa29.95■■■□□ 2.38
RAPGEF1-206ENST00000438647 MAGEB6P1A0A0J9YX57 407 aa29.94■■■□□ 2.38
RAPGEF1-206ENST00000438647 HLA-DOAP06340 250 aa29.94■■■□□ 2.38
RAPGEF1-206ENST00000438647 GCC1Q96CN9 775 aa29.94■■■□□ 2.38
RAPGEF1-206ENST00000438647 FOCADQ5VW36 1801 aa29.94■■■□□ 2.38
RAPGEF1-206ENST00000438647 ZNF296Q8WUU4 475 aaPredicted RBP29.93■■■□□ 2.38
RAPGEF1-206ENST00000438647 RIOK1Q9BRS2 568 aaKnown RBP29.93■■■□□ 2.38
RAPGEF1-206ENST00000438647 TRIM34Q9BYJ4 488 aa29.93■■■□□ 2.38
RAPGEF1-206ENST00000438647 KCNH4Q9UQ05 1017 aa29.93■■■□□ 2.38
RAPGEF1-206ENST00000438647 ZSCAN25Q6NSZ9 544 aa29.92■■■□□ 2.38
RAPGEF1-206ENST00000438647 FOXP4Q8IVH2 680 aaPredicted RBP29.92■■■□□ 2.38
RAPGEF1-206ENST00000438647 CDK5RAP2Q96SN8 1893 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms