RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ZNF341Q9BYN7 854 aa14.62□□□□□ -0.07
RTN4-211ENST00000438462 A0A0G2JLL6 359 aaPredicted RBP14.61□□□□□ -0.07
RTN4-211ENST00000438462 RGS20O76081 388 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 CACNB3P54284 484 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
RTN4-211ENST00000438462 KCTD2Q14681 263 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 MIGA2Q7L4E1 593 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 PRRT2Q7Z6L0 340 aaPredicted RBP14.61□□□□□ -0.07
RTN4-211ENST00000438462 DZIP1LQ8IYY4 767 aaKnown RBP14.61□□□□□ -0.07
RTN4-211ENST00000438462 PRSS33Q8NF86 280 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 CDC5LQ99459 802 aaKnown RBP14.61□□□□□ -0.07
RTN4-211ENST00000438462 SLC45A1Q9Y2W3 748 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
RTN4-211ENST00000438462 DNM1LO00429 736 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 CXCL11O14625 94 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 ZKSCAN1P17029 563 aaPredicted RBP14.6□□□□□ -0.07
RTN4-211ENST00000438462 FPGSQ05932 587 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 SLC39A5Q6ZMH5 540 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 FASTKD5Q7L8L6 764 aaKnown RBP14.6□□□□□ -0.07
RTN4-211ENST00000438462 HOOK2Q96ED9 719 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 COG5Q9UP83 839 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
RTN4-211ENST00000438462 PDE8AO60658 829 aa14.59□□□□□ -0.07
RTN4-211ENST00000438462 ALADP13716 330 aa14.59□□□□□ -0.07
RTN4-211ENST00000438462 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
RTN4-211ENST00000438462 HSP90B1P14625 803 aaKnown RBP14.58□□□□□ -0.08
RTN4-211ENST00000438462 SNX17Q15036 470 aa14.58□□□□□ -0.08
RTN4-211ENST00000438462 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
RTN4-211ENST00000438462 PLBD2Q8NHP8 589 aa14.58□□□□□ -0.08
RTN4-211ENST00000438462 NKX2-4Q9H2Z4 354 aa14.58□□□□□ -0.08
RTN4-211ENST00000438462 MYH3P11055 1940 aa14.57□□□□□ -0.08
RTN4-211ENST00000438462 PTPN5P54829 565 aa14.57□□□□□ -0.08
RTN4-211ENST00000438462 NOL9Q5SY16 702 aaKnown RBP14.57□□□□□ -0.08
RTN4-211ENST00000438462 TTF2Q9UNY4 1162 aaKnown RBP14.57□□□□□ -0.08
RTN4-211ENST00000438462 A0A1B0GUL6 1792 aa14.56□□□□□ -0.08
RTN4-211ENST00000438462 CCL14Q16627 93 aa14.56□□□□□ -0.08
RTN4-211ENST00000438462 HFE2Q6ZVN8 426 aa14.56□□□□□ -0.08
RTN4-211ENST00000438462 GJD3Q8N144 294 aa14.56□□□□□ -0.08
RTN4-211ENST00000438462 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.56□□□□□ -0.087e-8■□□□□ 9.1
RTN4-211ENST00000438462 PHIPQ8WWQ0 1821 aa14.56□□□□□ -0.08
RTN4-211ENST00000438462 EPG5Q9HCE0 2579 aa14.56□□□□□ -0.08
RTN4-211ENST00000438462 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
RTN4-211ENST00000438462 RAG1P15918 1043 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 CRKP46108 304 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 KCNJ4P48050 445 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 EIF4G2P78344 907 aaKnown RBP eCLIP14.55□□□□□ -0.089e-7■■■■□ 19.9
RTN4-211ENST00000438462 COL9A2Q14055 689 aaPredicted RBP14.55□□□□□ -0.08
RTN4-211ENST00000438462 RAB30Q15771 203 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 SOCS4Q8WXH5 440 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 LPAR1Q92633 364 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 MSRAQ9UJ68 235 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 ZNF112Q9UJU3 913 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 TRANK1O15050 2925 aa14.55□□□□□ -0.08
RTN4-211ENST00000438462 SSTR3P32745 418 aaPredicted RBP14.54□□□□□ -0.08
RTN4-211ENST00000438462 ID4P47928 161 aa14.54□□□□□ -0.08
RTN4-211ENST00000438462 GJC2Q5T442 439 aaPredicted RBP14.54□□□□□ -0.08
RTN4-211ENST00000438462 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
RTN4-211ENST00000438462 JARID2Q92833 1246 aaPredicted RBP14.54□□□□□ -0.08
RTN4-211ENST00000438462 HLA-CQ95604 372 aa14.54□□□□□ -0.08
RTN4-211ENST00000438462 NUDT12Q9BQG2 462 aa14.54□□□□□ -0.08
RTN4-211ENST00000438462 SLC28A3Q9HAS3 691 aa14.54□□□□□ -0.08
RTN4-211ENST00000438462 FAM86C1Q9NVL1 165 aa14.54□□□□□ -0.08
RTN4-211ENST00000438462 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
RTN4-211ENST00000438462 PRRC2BQ5JSZ5 2229 aaKnown RBP14.54□□□□□ -0.08
RTN4-211ENST00000438462 MED19A0JLT2 244 aaPredicted RBP14.53□□□□□ -0.08
RTN4-211ENST00000438462 CLTBP09497 229 aa14.53□□□□□ -0.08
RTN4-211ENST00000438462 IL1R1P14778 569 aa14.53□□□□□ -0.08
RTN4-211ENST00000438462 TRIM28Q13263 835 aaKnown RBP14.53□□□□□ -0.08
RTN4-211ENST00000438462 FAM83AQ86UY5 434 aa14.53□□□□□ -0.08
RTN4-211ENST00000438462 PNMA3Q9UL41 463 aa14.53□□□□□ -0.08
RTN4-211ENST00000438462 AGTPBP1Q9UPW5 1226 aa14.53□□□□□ -0.08
RTN4-211ENST00000438462 LOC285556D6RIA3 1793 aa14.52□□□□□ -0.08
RTN4-211ENST00000438462 DCXO43602 365 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 CTSWP56202 376 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 TLE2Q04725 743 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 CNTNAP3BQ96NU0 1288 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 CNTNAP3Q9BZ76 1288 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 GREM2Q9H772 168 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 YBX2Q9Y2T7 364 aaKnown RBP14.52□□□□□ -0.09
RTN4-211ENST00000438462 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 MTCH2Q9Y6C9 303 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 ZHX2Q9Y6X8 837 aa14.52□□□□□ -0.09
RTN4-211ENST00000438462 MYO15AQ9UKN7 3530 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 DOCK1Q14185 1865 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 MYBBP1AQ9BQG0 1328 aaKnown RBP14.51□□□□□ -0.09
RTN4-211ENST00000438462 SNAP23O00161 211 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 KIAA0355O15063 1070 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 MFSD14BQ5SR56 506 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 RASIP1Q5U651 963 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 ZNF804AQ7Z570 1209 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 MFSD14AQ96MC6 490 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 ANKRD2Q9GZV1 360 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 TMOD2Q9NZR1 351 aa14.51□□□□□ -0.09
RTN4-211ENST00000438462 ZFHX2Q9C0A1 2572 aaPredicted RBP14.51□□□□□ -0.09
RTN4-211ENST00000438462 PLXNA3P51805 1871 aa14.5□□□□□ -0.09
RTN4-211ENST00000438462 CFAP47Q6ZTR5 3102 aa14.5□□□□□ -0.09
RTN4-211ENST00000438462 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
RTN4-211ENST00000438462 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
RTN4-211ENST00000438462 MSCO60682 206 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms