RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
SPEN-202ENST00000438066 ZNF157P51786 506 aaPredicted RBP8.42□□□□□ -1.06
SPEN-202ENST00000438066 DDR2Q16832 855 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 NEURL4Q96JN8 1562 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 CCDC113Q9H0I3 377 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 ZMYM4Q5VZL5 1548 aa8.42□□□□□ -1.06
SPEN-202ENST00000438066 PPP1R12AO14974 1030 aaPredicted RBP8.41□□□□□ -1.06
SPEN-202ENST00000438066 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
SPEN-202ENST00000438066 FAAP100Q0VG06 881 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 IFRD2Q12894 506 aaPredicted RBP8.41□□□□□ -1.06
SPEN-202ENST00000438066 SEPT6Q14141 434 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 CEP120Q8N960 986 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 APPBP2Q92624 585 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 CRBNQ96SW2 442 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 TLR7Q9NYK1 1049 aaKnown RBP8.41□□□□□ -1.06
SPEN-202ENST00000438066 ACTR10Q9NZ32 417 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 KIF13AQ9H1H9 1805 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 PRAG1Q86YV5 1406 aa8.41□□□□□ -1.06
SPEN-202ENST00000438066 A0A096LPE4 126 aa8.4□□□□□ -1.06
SPEN-202ENST00000438066 A0A1W2PPZ6 126 aa8.4□□□□□ -1.06
SPEN-202ENST00000438066 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.06
SPEN-202ENST00000438066 RPS26P62854 115 aaKnown RBP8.4□□□□□ -1.06
SPEN-202ENST00000438066 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.06
SPEN-202ENST00000438066 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.06
SPEN-202ENST00000438066 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
SPEN-202ENST00000438066 EFSO43281 561 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 FAM157BP0CG42 384 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 SOX18P35713 384 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 GIPRP48546 466 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 PLAURQ03405 335 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 DDX10Q13206 875 aaKnown RBP8.4□□□□□ -1.07
SPEN-202ENST00000438066 RAB44Q7Z6P3 723 aaPredicted RBP8.4□□□□□ -1.07
SPEN-202ENST00000438066 TRPM4Q8TD43 1214 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 GATAD2BQ8WXI9 593 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 ZNF576Q9H609 170 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 STRN4Q9NRL3 753 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 PRKAB1Q9Y478 270 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 KANK1Q14678 1352 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.07
SPEN-202ENST00000438066 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 PDPK1O15530 556 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
SPEN-202ENST00000438066 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
SPEN-202ENST00000438066 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 GK5Q6ZS86 529 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 LRRC3Q9BY71 257 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
SPEN-202ENST00000438066 TSPOAP1O95153 1857 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 MADDQ8WXG6 1647 aa8.39□□□□□ -1.07
SPEN-202ENST00000438066 ZC3H13Q5T200 1668 aaKnown RBP8.38□□□□□ -1.07
SPEN-202ENST00000438066 USP47Q96K76 1375 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 NFKBIEO00221 500 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 BMP1P13497 986 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 GYS2P54840 703 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 RASIP1Q5U651 963 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 POTEGQ6S5H5 508 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 HOMER1Q86YM7 354 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 RPUSD2Q8IZ73 545 aaKnown RBP8.38□□□□□ -1.07
SPEN-202ENST00000438066 BHMTQ93088 406 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 TNKS2Q9H2K2 1166 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 IFT172Q9UG01 1749 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 SOS2Q07890 1332 aaPredicted RBP8.38□□□□□ -1.07
SPEN-202ENST00000438066 ARID4BQ4LE39 1312 aaPredicted RBP8.38□□□□□ -1.07
SPEN-202ENST00000438066 KIF1BO60333 1816 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 CCDC7Q96M83 1385 aa8.38□□□□□ -1.07
SPEN-202ENST00000438066 FAM221AA4D161 298 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 KIF3BO15066 747 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 ZNF165P49910 485 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 SPEM2Q0P670 501 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 MPP2Q14168 576 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 FIGNL1Q6PIW4 674 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 TRIM67Q6ZTA4 783 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 DHX32Q7L7V1 743 aaKnown RBP8.37□□□□□ -1.07
SPEN-202ENST00000438066 BRMS1Q9HCU9 246 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 PCDHGC4Q9Y5F7 938 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 CAMSAP1Q5T5Y3 1602 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 ABCC3O15438 1527 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 GPRASP1Q5JY77 1395 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 SCARF1Q14162 830 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 RIPOR1Q6ZS17 1223 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 TMEM102Q8N9M5 508 aaPredicted RBP8.37□□□□□ -1.07
SPEN-202ENST00000438066 LEMD3Q9Y2U8 911 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
SPEN-202ENST00000438066 PDE2AO00408 941 aaPredicted RBP8.36□□□□□ -1.07
SPEN-202ENST00000438066 PARNO95453 639 aaKnown RBP8.36□□□□□ -1.07
SPEN-202ENST00000438066 THBS1P07996 1170 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 MAPTP10636 758 aaKnown RBP8.36□□□□□ -1.07
SPEN-202ENST00000438066 AMPD3Q01432 767 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 CLCQ05315 142 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 SQSTM1Q13501 440 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 RASGRF1Q13972 1273 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 REC114Q7Z4M0 266 aa8.36□□□□□ -1.07
SPEN-202ENST00000438066 KIAA0907Q7Z7F0 614 aaPredicted RBP8.36□□□□□ -1.07
SPEN-202ENST00000438066 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms