RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 RTN1Q16799 776 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 DBNLQ9UJU6 430 aaKnown RBP12.19□□□□□ -0.46
NOD1-206ENST00000434755 SMARCE1Q969G3 411 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 CLEC17AQ6ZS10 378 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 ALDH8A1Q9H2A2 487 aaPredicted RBP12.18□□□□□ -0.46
NOD1-206ENST00000434755 SASH1O94885 1247 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 CNNM3Q8NE01 707 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
NOD1-206ENST00000434755 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 PDE6AP16499 860 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 PDIA6Q15084 440 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
NOD1-206ENST00000434755 ATP8A2Q9NTI2 1148 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
NOD1-206ENST00000434755 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
NOD1-206ENST00000434755 CALML3P27482 149 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 CCDC70Q6NSX1 233 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 ARMT1Q9H993 441 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 XRCC6P12956 609 aaKnown RBP eCLIP12.17□□□□□ -0.46
NOD1-206ENST00000434755 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
NOD1-206ENST00000434755 UBA7P41226 1012 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
NOD1-206ENST00000434755 CSF1RP07333 972 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
NOD1-206ENST00000434755 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
NOD1-206ENST00000434755 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 A0A0D9SFI3 127 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 B4E1Z4 1266 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 PLSCR1O15162 318 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 GSDMDP57764 484 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 LZTS2Q9BRK4 669 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 GJA3Q9Y6H8 435 aa12.17□□□□□ -0.46
NOD1-206ENST00000434755 PFKFB2O60825 505 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 NFIXQ14938 502 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 H7C1D1 291 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 DNM1Q05193 864 aaKnown RBP12.16□□□□□ -0.46
NOD1-206ENST00000434755 DLGAP5Q15398 846 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 ENOX2Q16206 610 aaKnown RBP12.16□□□□□ -0.46
NOD1-206ENST00000434755 HEATR3Q7Z4Q2 680 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 ZNHIT6Q9NWK9 470 aaKnown RBP12.16□□□□□ -0.46
NOD1-206ENST00000434755 ITPK1Q13572 414 aa12.16□□□□□ -0.46
NOD1-206ENST00000434755 PUS3Q9BZE2 481 aaKnown RBP12.16□□□□□ -0.46
NOD1-206ENST00000434755 LIG1P18858 919 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 MATR3P43243 847 aaKnown RBP eCLIP12.15□□□□□ -0.46
NOD1-206ENST00000434755 HSP90AA4PQ58FG1 418 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 SUGT1Q9Y2Z0 365 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 FOXO4P98177 505 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 SP8Q8IXZ3 490 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 PTH1RQ03431 593 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
NOD1-206ENST00000434755 FAM173BQ6P4H8 233 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
NOD1-206ENST00000434755 E7EWF7 191 aa12.15□□□□□ -0.47
NOD1-206ENST00000434755 GTF2IP78347 998 aa12.15□□□□□ -0.47
NOD1-206ENST00000434755 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.47
NOD1-206ENST00000434755 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.47
NOD1-206ENST00000434755 AATFQ9NY61 560 aaKnown RBP eCLIP12.15□□□□□ -0.47
NOD1-206ENST00000434755 PIM2Q9P1W9 311 aa12.15□□□□□ -0.47
NOD1-206ENST00000434755 SAMM50Q9Y512 469 aa12.15□□□□□ -0.47
NOD1-206ENST00000434755 B4DLN1 442 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 PHKA1P46020 1223 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 GYG1P46976 350 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 BCAMP50895 628 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 MRPL12P52815 198 aaKnown RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 SYCP1Q15431 976 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 SLC10A5Q5PT55 438 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 CPLX3Q8WVH0 158 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 HSPD1P10809 573 aaKnown RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 ZNF165P49910 485 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 SEPT11Q9NVA2 429 aaKnown RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 LTN1O94822 1766 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 TMEM266Q2M3C6 531 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
NOD1-206ENST00000434755 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 ZNF512BQ96KM6 892 aaPredicted RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
NOD1-206ENST00000434755 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms