RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 NOL10Q9BSC4 688 aaKnown RBP12.05□□□□□ -0.48
CD44-210ENST00000434472 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
CD44-210ENST00000434472 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
CD44-210ENST00000434472 LRP2BPQ9P2M1 347 aa12.05□□□□□ -0.48
CD44-210ENST00000434472 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
CD44-210ENST00000434472 PHLPP1O60346 1717 aa12.05□□□□□ -0.48
CD44-210ENST00000434472 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 IKBKBO14920 756 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 MYO1BO43795 1136 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 SYKP43405 635 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 CHRNDQ07001 517 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 UBE4AQ14139 1066 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 RTN1Q16799 776 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 LRRC8AQ8IWT6 810 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
CD44-210ENST00000434472 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
CD44-210ENST00000434472 HOOK1Q9UJC3 728 aaKnown RBP12.04□□□□□ -0.48
CD44-210ENST00000434472 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
CD44-210ENST00000434472 CYP7A1P22680 504 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 BCAMP50895 628 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 PTPAQ15257 358 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
CD44-210ENST00000434472 RESP18Q5W5W9 173 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 PHKBQ93100 1093 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 MAP3K14Q99558 947 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 TUBE1Q9UJT0 475 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 ANAPC4Q9UJX5 808 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
CD44-210ENST00000434472 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 A0A0G2JS52 829 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 NRDCO43847 1150 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
CD44-210ENST00000434472 DEXIO95424 95 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
CD44-210ENST00000434472 RXRAP19793 462 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 LRMPQ12912 555 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 ITPK1Q13572 414 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 CCDC144BQ3MJ40 725 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 CCDC144CPQ8IYA2 1237 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
CD44-210ENST00000434472 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 AIFM3Q96NN9 605 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
CD44-210ENST00000434472 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 TOMM22Q9NS69 142 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 KCND1Q9NSA2 647 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 CEP131Q9UPN4 1083 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 ZNF804BA4D1E1 1349 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
CD44-210ENST00000434472 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
CD44-210ENST00000434472 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.48
CD44-210ENST00000434472 SEMA3EO15041 775 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 PRKAB2O43741 272 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 MMP1P03956 469 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 MARCKSP29966 332 aaPredicted RBP12.02□□□□□ -0.49
CD44-210ENST00000434472 PPARAQ07869 468 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 TPD52L1Q16890 204 aaPredicted RBP12.02□□□□□ -0.49
CD44-210ENST00000434472 CAVIN4Q5BKX8 364 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.49
CD44-210ENST00000434472 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
CD44-210ENST00000434472 ESR2Q92731 530 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 ACSBG1Q96GR2 724 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 UBAC1Q9BSL1 405 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 OSBPL5Q9H0X9 879 aaPredicted RBP12.02□□□□□ -0.49
CD44-210ENST00000434472 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.49
CD44-210ENST00000434472 CHD4Q14839 1912 aa12.02□□□□□ -0.49
CD44-210ENST00000434472 KIF2AO00139 706 aaPredicted RBP12.01□□□□□ -0.49
CD44-210ENST00000434472 TNNT1P13805 278 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 XBP1P17861 261 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 SYCP1Q15431 976 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 DPCR1Q3MIW9 517 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 RRP12Q5JTH9 1297 aaKnown RBP12.01□□□□□ -0.49
CD44-210ENST00000434472 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 CRACR2BQ8N4Y2 399 aaPredicted RBP12.01□□□□□ -0.49
CD44-210ENST00000434472 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 MORC2Q9Y6X9 1032 aaPredicted RBP12.01□□□□□ -0.49
CD44-210ENST00000434472 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 BCL9LQ86UU0 1499 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 KAT6BQ8WYB5 2073 aa12.01□□□□□ -0.49
CD44-210ENST00000434472 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
CD44-210ENST00000434472 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
CD44-210ENST00000434472 CALM1P0DP23 149 aa12□□□□□ -0.49
CD44-210ENST00000434472 CALM2P0DP24 149 aa12□□□□□ -0.49
CD44-210ENST00000434472 CALM3P0DP25 149 aa12□□□□□ -0.49
CD44-210ENST00000434472 SKILP12757 684 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms