RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 ECEL1O95672 775 aa8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 RAC1P63000 192 aa8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 ERVK-24P63145 666 aa8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 TMEM201Q5SNT2 666 aa8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 MPRIPQ6WCQ1 1025 aa8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 JARID2Q92833 1246 aaPredicted RBP8□□□□□ -1.13
PTP4A1P3-201ENST00000433661 CASP7P55210 303 aa7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 LRRFIP1Q32MZ4 808 aaKnown RBP7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 EXOSC6Q5RKV6 272 aaKnown RBP7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 HDXQ7Z353 690 aa7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 TMEM130Q8N3G9 435 aa7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 WDR18Q9BV38 432 aa7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 GSX1Q9H4S2 264 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 ADAM30Q9UKF2 790 aa7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 PCDHA4Q9UN74 947 aa7.99□□□□□ -1.13
PTP4A1P3-201ENST00000433661 TLR3O15455 904 aaKnown RBP7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 AOC2O75106 756 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 DLGAP3O95886 979 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 ELNP15502 786 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 CDC25BP30305 580 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 EIF6P56537 245 aaKnown RBP7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 LRFN4Q6PJG9 635 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 IGF2-ASQ6U949 168 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 KCNK4Q9NYG8 393 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 MKL2Q9ULH7 1088 aa7.98□□□□□ -1.13
PTP4A1P3-201ENST00000433661 ETFBP38117 255 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 CLCQ05315 142 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 RAB33AQ14088 237 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 TRAPPC3LQ5T215 181 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 PLPPR2Q96GM1 343 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 OSBPL2Q9H1P3 480 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 NOP53Q9NZM5 478 aaKnown RBP7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 SIRPGQ9P1W8 387 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 PPT2Q9UMR5 302 aa7.97□□□□□ -1.13
PTP4A1P3-201ENST00000433661 FANCGO15287 622 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CANXP27824 592 aaKnown RBP7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 NLRP12P59046 1061 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 PDE4BQ07343 736 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 INPP5AQ14642 412 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 SVOPQ8N4V2 548 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 NEDD1Q8NHV4 660 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ACSBG1Q96GR2 724 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 FERD3LQ96RJ6 166 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 USP26Q9BXU7 913 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 MRPL18Q9H0U6 180 aaKnown RBP7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 RNF208Q9H0X6 261 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CRIM1Q9NZV1 1036 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 PCDHB14Q9Y5E9 798 aa7.96□□□□□ -1.14
PTP4A1P3-201ENST00000433661 HTR3BO95264 441 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 LIG1P18858 919 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CAP2P40123 477 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 SNRPNP63162 240 aaKnown RBP7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ID3Q02535 119 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CCDC144BQ3MJ40 725 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 Q6ZS46 218 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 KIAA1211Q6ZU35 1233 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 LSRQ86X29 649 aaPredicted RBP7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CPLX3Q8WVH0 158 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 TM9SF2Q99805 663 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 GMIPQ9P107 970 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 MSRB2Q9Y3D2 182 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CADPSQ9ULU8 1353 aa7.95□□□□□ -1.14
PTP4A1P3-201ENST00000433661 TMPRSS2O15393 492 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 DDX3YO15523 660 aaKnown RBP7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 TIAF1O95411 115 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 MCM4P33991 863 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CDK8P49336 464 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 NFE2L2Q16236 605 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 DUOXA2Q1HG44 320 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CDCP2Q5VXM1 449 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 GK5Q6ZS86 529 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ANKS3Q6ZW76 656 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 FAM169BQ8N8A8 192 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 TMEM40Q8WWA1 233 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CRBNQ96SW2 442 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 WNT10AQ9GZT5 417 aa7.94□□□□□ -1.14
PTP4A1P3-201ENST00000433661 NTF4P34130 210 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 TRIM28Q13263 835 aaKnown RBP7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 MLECQ14165 292 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ALYREFQ86V81 257 aaKnown RBP7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 RNF214Q8ND24 703 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 UBASH3BQ8TF42 649 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ELMO3Q96BJ8 720 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 RUSC1Q9BVN2 902 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 ZC3H12CQ9C0D7 883 aaKnown RBP7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 RRAGCQ9HB90 399 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 CYP4F12Q9HCS2 524 aa7.93□□□□□ -1.14
PTP4A1P3-201ENST00000433661 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms