RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 AKAP2Q9Y2D5 859 aa28.01■■■□□ 2.08
HOMER3-203ENST00000433218 POTEFA5A3E0 1075 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 ARID4AP29374 1257 aaPredicted RBP28.01■■■□□ 2.07
HOMER3-203ENST00000433218 SNAPC2Q13487 334 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 PICALMQ13492 652 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 POLA2Q14181 598 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 ZGPATQ8N5A5 531 aaKnown RBP28.01■■■□□ 2.07
HOMER3-203ENST00000433218 HOOK2Q96ED9 719 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 IDI2Q9BXS1 227 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 EFCC1Q9HA90 598 aa28.01■■■□□ 2.07
HOMER3-203ENST00000433218 CETPP11597 493 aa28■■■□□ 2.07
HOMER3-203ENST00000433218 RHBDL3P58872 404 aa28■■■□□ 2.07
HOMER3-203ENST00000433218 ZFYVE28Q9HCC9 887 aa28■■■□□ 2.07
HOMER3-203ENST00000433218 PHF20L1A8MW92 1017 aa27.99■■■□□ 2.07
HOMER3-203ENST00000433218 PPATQ06203 517 aa27.99■■■□□ 2.07
HOMER3-203ENST00000433218 NOL9Q5SY16 702 aaKnown RBP27.99■■■□□ 2.07
HOMER3-203ENST00000433218 SPATA5Q8NB90 893 aa27.99■■■□□ 2.07
HOMER3-203ENST00000433218 ADGRA2Q96PE1 1338 aa27.98■■■□□ 2.07
HOMER3-203ENST00000433218 FAM196BA6NMK8 535 aa27.98■■■□□ 2.07
HOMER3-203ENST00000433218 CCDC84Q86UT8 332 aaPredicted RBP27.98■■■□□ 2.07
HOMER3-203ENST00000433218 DOCK3Q8IZD9 2030 aa27.98■■■□□ 2.07
HOMER3-203ENST00000433218 MYH1P12882 1939 aa27.97■■■□□ 2.07
HOMER3-203ENST00000433218 CTGFP29279 349 aa27.97■■■□□ 2.07
HOMER3-203ENST00000433218 ERICH6Q7L0X2 663 aa27.97■■■□□ 2.07
HOMER3-203ENST00000433218 NSUN4Q96CB9 384 aaKnown RBP27.97■■■□□ 2.07
HOMER3-203ENST00000433218 DBNDD2Q9BQY9 259 aa27.97■■■□□ 2.07
HOMER3-203ENST00000433218 KCNH4Q9UQ05 1017 aa27.97■■■□□ 2.07
HOMER3-203ENST00000433218 PTCH2Q9Y6C5 1203 aa27.97■■■□□ 2.07
HOMER3-203ENST00000433218 ENTPD3O75355 529 aa27.96■■■□□ 2.07
HOMER3-203ENST00000433218 G3BP1Q13283 466 aaKnown RBP eCLIP27.96■■■□□ 2.07
HOMER3-203ENST00000433218 ITPRIPQ8IWB1 547 aa27.96■■■□□ 2.07
HOMER3-203ENST00000433218 SSH3Q8TE77 659 aa27.96■■■□□ 2.07
HOMER3-203ENST00000433218 FAM163AQ96GL9 167 aaPredicted RBP27.96■■■□□ 2.07
HOMER3-203ENST00000433218 SNRKQ9NRH2 765 aa27.96■■■□□ 2.07
HOMER3-203ENST00000433218 TLR7Q9NYK1 1049 aaKnown RBP27.96■■■□□ 2.07
HOMER3-203ENST00000433218 TLR2O60603 784 aa27.95■■■□□ 2.07
HOMER3-203ENST00000433218 GPR75-ASB3A0A0A6YYF3 556 aa27.94■■■□□ 2.06
HOMER3-203ENST00000433218 TNNI3KQ59H18 835 aa27.94■■■□□ 2.06
HOMER3-203ENST00000433218 GORABQ5T7V8 394 aa27.94■■■□□ 2.06
HOMER3-203ENST00000433218 ZSCAN29Q8IWY8 852 aaPredicted RBP27.94■■■□□ 2.06
HOMER3-203ENST00000433218 FTSJ3Q8IY81 847 aaKnown RBP27.94■■■□□ 2.06
HOMER3-203ENST00000433218 CPA4Q9UI42 421 aa27.94■■■□□ 2.06
HOMER3-203ENST00000433218 FPGT-TNNI3KV9GXZ4 949 aa27.94■■■□□ 2.06
HOMER3-203ENST00000433218 PDHXO00330 501 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 SPTY2D1Q68D10 685 aaPredicted RBP27.92■■■□□ 2.06
HOMER3-203ENST00000433218 ARMC5Q96C12 935 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 LACTBP83111 547 aaPredicted RBP27.92■■■□□ 2.06
HOMER3-203ENST00000433218 ATP8B2P98198 1209 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 GPAT2Q6NUI2 795 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 ADGRA1Q86SQ6 560 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 SCYL3Q8IZE3 742 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 RAI14Q9P0K7 980 aa27.92■■■□□ 2.06
HOMER3-203ENST00000433218 DDX60LQ5H9U9 1706 aaKnown RBP27.91■■■□□ 2.06
HOMER3-203ENST00000433218 ZBTB7BO15156 539 aaPredicted RBP27.91■■■□□ 2.06
HOMER3-203ENST00000433218 ANKRD23Q86SG2 305 aa27.91■■■□□ 2.06
HOMER3-203ENST00000433218 ZCCHC17Q9NP64 241 aaKnown RBP27.91■■■□□ 2.06
HOMER3-203ENST00000433218 PTPRAP18433 802 aa27.9■■■□□ 2.06
HOMER3-203ENST00000433218 OS9Q13438 667 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-203ENST00000433218 C17orf99Q6UX52 265 aa27.9■■■□□ 2.06
HOMER3-203ENST00000433218 DBNLQ9UJU6 430 aaKnown RBP27.9■■■□□ 2.06
HOMER3-203ENST00000433218 COL2A1P02458 1487 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-203ENST00000433218 NAV1Q8NEY1 1877 aa27.9■■■□□ 2.06
HOMER3-203ENST00000433218 SURF6O75683 361 aaKnown RBP27.89■■■□□ 2.06
HOMER3-203ENST00000433218 MYCP01106 439 aaPredicted RBP27.89■■■□□ 2.06
HOMER3-203ENST00000433218 CYP2C8P10632 490 aa27.89■■■□□ 2.06
HOMER3-203ENST00000433218 MAP3K10Q02779 954 aa27.89■■■□□ 2.06
HOMER3-203ENST00000433218 RRP1BQ14684 758 aaKnown RBP27.89■■■□□ 2.06
HOMER3-203ENST00000433218 SLF2Q8IX21 1173 aa27.89■■■□□ 2.06
HOMER3-203ENST00000433218 SH3RF3Q8TEJ3 882 aaPredicted RBP27.89■■■□□ 2.06
HOMER3-203ENST00000433218 ZNF333Q96JL9 665 aa27.89■■■□□ 2.06
HOMER3-203ENST00000433218 NDUFB9Q9Y6M9 179 aa27.88■■■□□ 2.05
HOMER3-203ENST00000433218 ZHX2Q9Y6X8 837 aa27.88■■■□□ 2.05
HOMER3-203ENST00000433218 CYP2E1P05181 493 aaPredicted RBP27.87■■■□□ 2.05
HOMER3-203ENST00000433218 TTC39AQ5SRH9 613 aa27.87■■■□□ 2.05
HOMER3-203ENST00000433218 CEP85Q6P2H3 762 aa27.87■■■□□ 2.05
HOMER3-203ENST00000433218 SH3TC2Q8TF17 1288 aa27.87■■■□□ 2.05
HOMER3-203ENST00000433218 OSBPL5Q9H0X9 879 aaPredicted RBP27.87■■■□□ 2.05
HOMER3-203ENST00000433218 CEP290O15078 2479 aa27.86■■■□□ 2.05
HOMER3-203ENST00000433218 A0A0G2JLL6 359 aaPredicted RBP27.86■■■□□ 2.05
HOMER3-203ENST00000433218 EN2P19622 333 aaPredicted RBP27.86■■■□□ 2.05
HOMER3-203ENST00000433218 PRRT2Q7Z6L0 340 aaPredicted RBP27.86■■■□□ 2.05
HOMER3-203ENST00000433218 TRIM47Q96LD4 638 aa27.86■■■□□ 2.05
HOMER3-203ENST00000433218 GPR108Q9NPR9 543 aa27.86■■■□□ 2.05
HOMER3-203ENST00000433218 PIH1D3Q9NQM4 214 aaKnown RBP27.86■■■□□ 2.05
HOMER3-203ENST00000433218 AFG3L2Q9Y4W6 797 aa27.86■■■□□ 2.05
HOMER3-203ENST00000433218 UQCRFS1P1P0C7P4 283 aa27.85■■■□□ 2.05
HOMER3-203ENST00000433218 ZAP70P43403 619 aa27.85■■■□□ 2.05
HOMER3-203ENST00000433218 SLC9C1Q4G0N8 1177 aa27.85■■■□□ 2.05
HOMER3-203ENST00000433218 CCDC8Q9H0W5 538 aaPredicted RBP27.85■■■□□ 2.05
HOMER3-203ENST00000433218 AATFQ9NY61 560 aaKnown RBP eCLIP27.85■■■□□ 2.05
HOMER3-203ENST00000433218 LRP2BPQ9P2M1 347 aa27.85■■■□□ 2.05
HOMER3-203ENST00000433218 NOP58Q9Y2X3 529 aaKnown RBP27.85■■■□□ 2.05
HOMER3-203ENST00000433218 TRIM75PA6NK02 468 aa27.84■■■□□ 2.05
HOMER3-203ENST00000433218 SHROOM1Q2M3G4 852 aaPredicted RBP27.84■■■□□ 2.05
HOMER3-203ENST00000433218 TEX11Q8IYF3 940 aa27.84■■■□□ 2.05
HOMER3-203ENST00000433218 EAF2Q96CJ1 260 aaPredicted RBP27.84■■■□□ 2.05
HOMER3-203ENST00000433218 PICK1Q9NRD5 415 aa27.84■■■□□ 2.05
HOMER3-203ENST00000433218 EXOC6BQ9Y2D4 811 aa27.84■■■□□ 2.05
HOMER3-203ENST00000433218 GADL1Q6ZQY3 521 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms