RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 TBC1D9Q6ZT07 1266 aa18.59■□□□□ 0.57
PTCD1-204ENST00000430982 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
PTCD1-204ENST00000430982 DAGLAQ9Y4D2 1042 aa18.59■□□□□ 0.57
PTCD1-204ENST00000430982 TCP10L2B9ZVM9 353 aa18.58■□□□□ 0.56
PTCD1-204ENST00000430982 ARHGEF6Q15052 776 aa18.58■□□□□ 0.56
PTCD1-204ENST00000430982 APOBEC3HQ6NTF7 200 aaKnown RBP18.58■□□□□ 0.56
PTCD1-204ENST00000430982 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.58■□□□□ 0.56
PTCD1-204ENST00000430982 TEPSINQ96N21 525 aa18.58■□□□□ 0.56
PTCD1-204ENST00000430982 TMOD2Q9NZR1 351 aa18.58■□□□□ 0.56
PTCD1-204ENST00000430982 RAI14Q9P0K7 980 aa18.58■□□□□ 0.56
PTCD1-204ENST00000430982 CACNB3P54284 484 aa18.57■□□□□ 0.56
PTCD1-204ENST00000430982 TNFAIP1Q13829 316 aa18.57■□□□□ 0.56
PTCD1-204ENST00000430982 ZNF512BQ96KM6 892 aaPredicted RBP18.57■□□□□ 0.56
PTCD1-204ENST00000430982 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
PTCD1-204ENST00000430982 PRO3102Q9H379 93 aa18.57■□□□□ 0.56
PTCD1-204ENST00000430982 ELP3Q9H9T3 547 aa18.57■□□□□ 0.56
PTCD1-204ENST00000430982 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.57■□□□□ 0.56
PTCD1-204ENST00000430982 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
PTCD1-204ENST00000430982 ZAP70P43403 619 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 TAF1CQ15572 869 aaPredicted RBP18.56■□□□□ 0.56
PTCD1-204ENST00000430982 SLC4A8Q2Y0W8 1093 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 SLF2Q8IX21 1173 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 FAM43AQ8N2R8 423 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 SHISA4Q96DD7 197 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 DCTPP1Q9H773 170 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 ZFYVE28Q9HCC9 887 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 LRP2BPQ9P2M1 347 aa18.56■□□□□ 0.56
PTCD1-204ENST00000430982 TNNI2P48788 182 aa18.55■□□□□ 0.56
PTCD1-204ENST00000430982 MECOMQ03112 1051 aa18.55■□□□□ 0.56
PTCD1-204ENST00000430982 CHRDL2Q6WN34 429 aa18.55■□□□□ 0.56
PTCD1-204ENST00000430982 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.564e-20■■■□□ 15.9
PTCD1-204ENST00000430982 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
PTCD1-204ENST00000430982 ZCCHC17Q9NP64 241 aaKnown RBP18.55■□□□□ 0.56
PTCD1-204ENST00000430982 CCL15-CCL14A0A0B4J2E2 113 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 CYP2E1P05181 493 aaPredicted RBP18.54■□□□□ 0.56
PTCD1-204ENST00000430982 GTF2A2P52657 109 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 GSTO1P78417 241 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 VGLL4Q14135 290 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 CCL15Q16663 113 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 UBE2Q1Q7Z7E8 422 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 CDAN1Q8IWY9 1227 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 USP40Q9NVE5 1235 aa18.54■□□□□ 0.56
PTCD1-204ENST00000430982 RBM27Q9P2N5 1060 aaKnown RBP18.54■□□□□ 0.56
PTCD1-204ENST00000430982 TLR2O60603 784 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 GNRH1P01148 92 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 CDC42EP5Q6NZY7 148 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 SH3TC2Q8TF17 1288 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 NSUN4Q96CB9 384 aaKnown RBP18.53■□□□□ 0.56
PTCD1-204ENST00000430982 ARHGAP39Q9C0H5 1083 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 TMEM39BQ9GZU3 492 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 PIH1D3Q9NQM4 214 aaKnown RBP18.53■□□□□ 0.56
PTCD1-204ENST00000430982 NDUFB9Q9Y6M9 179 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 COL6A3P12111 3177 aa18.53■□□□□ 0.56
PTCD1-204ENST00000430982 MROH7-TTC4A0A0A0MT08 1334 aa18.52■□□□□ 0.56
PTCD1-204ENST00000430982 GAKO14976 1311 aa18.52■□□□□ 0.56
PTCD1-204ENST00000430982 LDHCP07864 332 aa18.52■□□□□ 0.56
PTCD1-204ENST00000430982 BTDP43251 543 aa18.52■□□□□ 0.56
PTCD1-204ENST00000430982 PRMT2P55345 433 aa18.52■□□□□ 0.56
PTCD1-204ENST00000430982 LACTBP83111 547 aaPredicted RBP18.52■□□□□ 0.56
PTCD1-204ENST00000430982 AAMPQ13685 434 aa18.52■□□□□ 0.56
PTCD1-204ENST00000430982 SPDYE5A6NIY4 337 aa18.51■□□□□ 0.55
PTCD1-204ENST00000430982 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
PTCD1-204ENST00000430982 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
PTCD1-204ENST00000430982 ZNF384Q8TF68 577 aa18.51■□□□□ 0.55
PTCD1-204ENST00000430982 FAM163AQ96GL9 167 aaPredicted RBP18.51■□□□□ 0.55
PTCD1-204ENST00000430982 IDH1O75874 414 aaKnown RBP18.5■□□□□ 0.55
PTCD1-204ENST00000430982 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
PTCD1-204ENST00000430982 MAP3K9P80192 1104 aa18.5■□□□□ 0.55
PTCD1-204ENST00000430982 TCP10Q12799 353 aa18.5■□□□□ 0.55
PTCD1-204ENST00000430982 FAM83AQ86UY5 434 aa18.5■□□□□ 0.55
PTCD1-204ENST00000430982 DNAJC2Q99543 621 aaKnown RBP18.5■□□□□ 0.55
PTCD1-204ENST00000430982 LAMA3Q16787 3333 aa18.5■□□□□ 0.55
PTCD1-204ENST00000430982 GPR75-ASB3A0A0A6YYF3 556 aa18.49■□□□□ 0.55
PTCD1-204ENST00000430982 NFIAQ12857 509 aa18.49■□□□□ 0.55
PTCD1-204ENST00000430982 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.49■□□□□ 0.55
PTCD1-204ENST00000430982 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
PTCD1-204ENST00000430982 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
PTCD1-204ENST00000430982 ANTXR1Q9H6X2 564 aa18.49■□□□□ 0.55
PTCD1-204ENST00000430982 SNCAIPQ9Y6H5 919 aa18.49■□□□□ 0.55
PTCD1-204ENST00000430982 A0A0C4DFX4 3053 aa18.49■□□□□ 0.55
PTCD1-204ENST00000430982 BTBD19C9JJ37 291 aa18.48■□□□□ 0.55
PTCD1-204ENST00000430982 MYCP01106 439 aaPredicted RBP18.48■□□□□ 0.55
PTCD1-204ENST00000430982 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
PTCD1-204ENST00000430982 MTFR1Q15390 333 aa18.48■□□□□ 0.55
PTCD1-204ENST00000430982 FAM151AQ8WW52 585 aa18.48■□□□□ 0.55
PTCD1-204ENST00000430982 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
PTCD1-204ENST00000430982 GOLIM4O00461 696 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 CETPP11597 493 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 ATP5JP18859 108 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 CTGFP29279 349 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 KIF22Q14807 665 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 C17orf99Q6UX52 265 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 NKX2-3Q8TAU0 364 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 FAM198AQ9UFP1 575 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 CSADQ9Y600 493 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 CUL9Q8IWT3 2517 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
PTCD1-204ENST00000430982 DLL1O00548 723 aa18.46■□□□□ 0.55
PTCD1-204ENST00000430982 CYP7A1P22680 504 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms