RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FKTNO75072 461 aa21.51■■□□□ 1.03
NUP50-208ENST00000430547 MAP4K4O95819 1239 aaPredicted RBP21.51■■□□□ 1.03
NUP50-208ENST00000430547 CCL15Q16663 113 aa21.51■■□□□ 1.03
NUP50-208ENST00000430547 NAA16Q6N069 864 aaPredicted RBP21.51■■□□□ 1.03
NUP50-208ENST00000430547 ZNF384Q8TF68 577 aa21.51■■□□□ 1.03
NUP50-208ENST00000430547 TESPA1A2RU30 521 aaPredicted RBP21.5■■□□□ 1.03
NUP50-208ENST00000430547 APBB1O00213 710 aa21.5■■□□□ 1.03
NUP50-208ENST00000430547 WDHD1O75717 1129 aaPredicted RBP21.5■■□□□ 1.03
NUP50-208ENST00000430547 INPP5BP32019 993 aa21.5■■□□□ 1.03
NUP50-208ENST00000430547 ZFPM1Q8IX07 1006 aa21.5■■□□□ 1.03
NUP50-208ENST00000430547 CDK5RAP2Q96SN8 1893 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 BAG3O95817 575 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 CYP2E1P05181 493 aaPredicted RBP21.49■■□□□ 1.03
NUP50-208ENST00000430547 ZAP70P43403 619 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 CLASRPQ8N2M8 674 aaKnown RBP21.49■■□□□ 1.03
NUP50-208ENST00000430547 RHPN1Q8TCX5 695 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 KIF1BPQ96EK5 621 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 MS4A4AQ96JQ5 239 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 DDX4Q9NQI0 724 aaKnown RBP21.49■■□□□ 1.03
NUP50-208ENST00000430547 DOCK1Q14185 1865 aa21.49■■□□□ 1.03
NUP50-208ENST00000430547 IGSF3O75054 1194 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 CETPP11597 493 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 RHBDL3P58872 404 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 PPATQ06203 517 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 PPIL2Q13356 520 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 SNAPC2Q13487 334 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 C20orf194Q5TEA3 1177 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 PTPN18Q99952 460 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 R3HDMLQ9H3Y0 253 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 ZNF112Q9UJU3 913 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 FOCADQ5VW36 1801 aa21.48■■□□□ 1.03
NUP50-208ENST00000430547 IRF6O14896 467 aa21.47■■□□□ 1.03
NUP50-208ENST00000430547 PLCG2P16885 1265 aa21.47■■□□□ 1.03
NUP50-208ENST00000430547 CRHR2Q13324 411 aa21.47■■□□□ 1.03
NUP50-208ENST00000430547 TEX11Q8IYF3 940 aa21.47■■□□□ 1.03
NUP50-208ENST00000430547 BRI3BPQ8WY22 251 aa21.47■■□□□ 1.03
NUP50-208ENST00000430547 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
NUP50-208ENST00000430547 DDTLA6NHG4 134 aaPredicted RBP21.46■■□□□ 1.03
NUP50-208ENST00000430547 RAB11FIP3O75154 756 aa21.46■■□□□ 1.03
NUP50-208ENST00000430547 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
NUP50-208ENST00000430547 TAF1CQ15572 869 aaPredicted RBP21.46■■□□□ 1.03
NUP50-208ENST00000430547 PKN2Q16513 984 aaKnown RBP21.46■■□□□ 1.03
NUP50-208ENST00000430547 NOL9Q5SY16 702 aaKnown RBP21.46■■□□□ 1.03
NUP50-208ENST00000430547 AATFQ9NY61 560 aaKnown RBP eCLIP21.46■■□□□ 1.03
NUP50-208ENST00000430547 ATRNL1Q5VV63 1379 aa21.46■■□□□ 1.03
NUP50-208ENST00000430547 IDH1O75874 414 aaKnown RBP21.45■■□□□ 1.02
NUP50-208ENST00000430547 IFIT2P09913 472 aaKnown RBP21.45■■□□□ 1.02
NUP50-208ENST00000430547 SH3BP5LQ7L8J4 393 aa21.45■■□□□ 1.02
NUP50-208ENST00000430547 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
NUP50-208ENST00000430547 PIH1D3Q9NQM4 214 aaKnown RBP21.45■■□□□ 1.02
NUP50-208ENST00000430547 PICK1Q9NRD5 415 aa21.45■■□□□ 1.02
NUP50-208ENST00000430547 ATAD5Q96QE3 1844 aa21.45■■□□□ 1.02
NUP50-208ENST00000430547 COL2A1P02458 1487 aaPredicted RBP21.45■■□□□ 1.02
NUP50-208ENST00000430547 SH3RF3Q8TEJ3 882 aaPredicted RBP21.44■■□□□ 1.02
NUP50-208ENST00000430547 OSBPL5Q9H0X9 879 aaPredicted RBP21.44■■□□□ 1.02
NUP50-208ENST00000430547 ZFYVE28Q9HCC9 887 aa21.44■■□□□ 1.02
NUP50-208ENST00000430547 SCYL3Q8IZE3 742 aa21.43■■□□□ 1.02
NUP50-208ENST00000430547 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
NUP50-208ENST00000430547 ERO1AQ96HE7 468 aa21.43■■□□□ 1.02
NUP50-208ENST00000430547 CYP7A1P22680 504 aa21.42■■□□□ 1.02
NUP50-208ENST00000430547 MAP3K12Q12852 859 aa21.42■■□□□ 1.02
NUP50-208ENST00000430547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.42■■□□□ 1.02
NUP50-208ENST00000430547 ZCCHC17Q9NP64 241 aaKnown RBP21.42■■□□□ 1.02
NUP50-208ENST00000430547 NDUFB9Q9Y6M9 179 aa21.42■■□□□ 1.02
NUP50-208ENST00000430547 MYH1P12882 1939 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 PHF20L1A8MW92 1017 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 PPP4CP60510 307 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 SP3Q02447 781 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 MAP3K10Q02779 954 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 TTF1Q15361 905 aaPredicted RBP21.41■■□□□ 1.02
NUP50-208ENST00000430547 ADGRA1Q86SQ6 560 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 CERS3Q8IU89 383 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
NUP50-208ENST00000430547 PTPRFP10586 1907 aa21.41■■□□□ 1.02
NUP50-208ENST00000430547 BTBD19C9JJ37 291 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 TBC1D12O60347 775 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 CTNND1O60716 968 aaKnown RBP21.4■■□□□ 1.02
NUP50-208ENST00000430547 FBXO46Q6PJ61 603 aaPredicted RBP21.4■■□□□ 1.02
NUP50-208ENST00000430547 TMED8Q6PL24 325 aaPredicted RBP21.4■■□□□ 1.02
NUP50-208ENST00000430547 MAGEB6Q8N7X4 407 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 TGFBRAP1Q8WUH2 860 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
NUP50-208ENST00000430547 KCNH4Q9UQ05 1017 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 TRIM17Q9Y577 477 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 PHIPQ8WWQ0 1821 aa21.4■■□□□ 1.02
NUP50-208ENST00000430547 MAPKAPK5Q8IW41 473 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 CD99L2Q8TCZ2 262 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 TRIM34Q9BYJ4 488 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 ANTXR1Q9H6X2 564 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 ZHX2Q9Y6X8 837 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 SIPA1L1O43166 1804 aa21.39■■□□□ 1.01
NUP50-208ENST00000430547 FLT1P17948 1338 aa21.38■■□□□ 1.01
NUP50-208ENST00000430547 FAM196BA6NMK8 535 aa21.38■■□□□ 1.01
NUP50-208ENST00000430547 PTPRAP18433 802 aa21.38■■□□□ 1.01
NUP50-208ENST00000430547 ARHGEF6Q15052 776 aa21.38■■□□□ 1.01
NUP50-208ENST00000430547 DNAJC2Q99543 621 aaKnown RBP21.38■■□□□ 1.01
NUP50-208ENST00000430547 LRRCC1Q9C099 1032 aa21.38■■□□□ 1.01
NUP50-208ENST00000430547 HERC5Q9UII4 1024 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms