RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ZGPATQ8N5A5 531 aaKnown RBP21.12■□□□□ 0.97
CPSF4-203ENST00000430038 NSUN4Q96CB9 384 aaKnown RBP21.12■□□□□ 0.97
CPSF4-203ENST00000430038 HOOK2Q96ED9 719 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 ARHGAP39Q9C0H5 1083 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 PTPRFP10586 1907 aa21.12■□□□□ 0.97
CPSF4-203ENST00000430038 ENTPD3O75355 529 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 MAP3K10Q02779 954 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 SNAPC2Q13487 334 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 NOL9Q5SY16 702 aaKnown RBP21.11■□□□□ 0.97
CPSF4-203ENST00000430038 ERICH6Q7L0X2 663 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 EFCC1Q9HA90 598 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 ZFYVE28Q9HCC9 887 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 SNRKQ9NRH2 765 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.11■□□□□ 0.97
CPSF4-203ENST00000430038 KCNH4Q9UQ05 1017 aa21.11■□□□□ 0.97
CPSF4-203ENST00000430038 CDK5RAP2Q96SN8 1893 aa21.1■□□□□ 0.97
CPSF4-203ENST00000430038 POTEFA5A3E0 1075 aa21.1■□□□□ 0.97
CPSF4-203ENST00000430038 CTGFP29279 349 aa21.1■□□□□ 0.97
CPSF4-203ENST00000430038 PICALMQ13492 652 aa21.1■□□□□ 0.97
CPSF4-203ENST00000430038 DBNDD2Q9BQY9 259 aa21.1■□□□□ 0.97
CPSF4-203ENST00000430038 TLR2O60603 784 aa21.09■□□□□ 0.97
CPSF4-203ENST00000430038 TNNI3KQ59H18 835 aa21.09■□□□□ 0.97
CPSF4-203ENST00000430038 SPTY2D1Q68D10 685 aaPredicted RBP21.09■□□□□ 0.97
CPSF4-203ENST00000430038 FPGT-TNNI3KV9GXZ4 949 aa21.09■□□□□ 0.97
CPSF4-203ENST00000430038 GORABQ5T7V8 394 aa21.08■□□□□ 0.97
CPSF4-203ENST00000430038 GPAT2Q6NUI2 795 aa21.08■□□□□ 0.97
CPSF4-203ENST00000430038 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
CPSF4-203ENST00000430038 PANK1Q8TE04 598 aa21.08■□□□□ 0.97
CPSF4-203ENST00000430038 TLR7Q9NYK1 1049 aaKnown RBP21.08■□□□□ 0.97
CPSF4-203ENST00000430038 SIPA1L1O43166 1804 aa21.08■□□□□ 0.96
CPSF4-203ENST00000430038 ZBED9Q6R2W3 1325 aa21.07■□□□□ 0.96
CPSF4-203ENST00000430038 DOCK1Q14185 1865 aa21.07■□□□□ 0.96
CPSF4-203ENST00000430038 FAM196BA6NMK8 535 aa21.07■□□□□ 0.96
CPSF4-203ENST00000430038 SURF6O75683 361 aaKnown RBP21.07■□□□□ 0.96
CPSF4-203ENST00000430038 ECM2O94769 699 aaPredicted RBP21.07■□□□□ 0.96
CPSF4-203ENST00000430038 C17orf99Q6UX52 265 aa21.07■□□□□ 0.96
CPSF4-203ENST00000430038 CCDC84Q86UT8 332 aaPredicted RBP21.07■□□□□ 0.96
CPSF4-203ENST00000430038 GPR108Q9NPR9 543 aa21.07■□□□□ 0.96
CPSF4-203ENST00000430038 NOP58Q9Y2X3 529 aaKnown RBP21.07■□□□□ 0.96
CPSF4-203ENST00000430038 ADGRA2Q96PE1 1338 aa21.06■□□□□ 0.96
CPSF4-203ENST00000430038 RBBP6Q7Z6E9 1792 aaKnown RBP21.06■□□□□ 0.96
CPSF4-203ENST00000430038 RRP1BQ14684 758 aaKnown RBP21.06■□□□□ 0.96
CPSF4-203ENST00000430038 ADGRA1Q86SQ6 560 aa21.06■□□□□ 0.96
CPSF4-203ENST00000430038 ZSCAN29Q8IWY8 852 aaPredicted RBP21.06■□□□□ 0.96
CPSF4-203ENST00000430038 RAI14Q9P0K7 980 aa21.06■□□□□ 0.96
CPSF4-203ENST00000430038 CPA4Q9UI42 421 aa21.06■□□□□ 0.96
CPSF4-203ENST00000430038 PTCH2Q9Y6C5 1203 aa21.06■□□□□ 0.96
CPSF4-203ENST00000430038 PDHXO00330 501 aa21.05■□□□□ 0.96
CPSF4-203ENST00000430038 CYP2E1P05181 493 aaPredicted RBP21.05■□□□□ 0.96
CPSF4-203ENST00000430038 PTPRAP18433 802 aa21.05■□□□□ 0.96
CPSF4-203ENST00000430038 ANKRD23Q86SG2 305 aa21.05■□□□□ 0.96
CPSF4-203ENST00000430038 SLF2Q8IX21 1173 aa21.05■□□□□ 0.96
CPSF4-203ENST00000430038 FTSJ3Q8IY81 847 aaKnown RBP21.05■□□□□ 0.96
CPSF4-203ENST00000430038 EAF2Q96CJ1 260 aaPredicted RBP21.05■□□□□ 0.96
CPSF4-203ENST00000430038 ZCCHC17Q9NP64 241 aaKnown RBP21.05■□□□□ 0.96
CPSF4-203ENST00000430038 DBNLQ9UJU6 430 aaKnown RBP21.05■□□□□ 0.96
CPSF4-203ENST00000430038 AFG3L2Q9Y4W6 797 aa21.05■□□□□ 0.96
CPSF4-203ENST00000430038 ZHX2Q9Y6X8 837 aa21.05■□□□□ 0.96
CPSF4-203ENST00000430038 LACTBP83111 547 aaPredicted RBP21.04■□□□□ 0.96
CPSF4-203ENST00000430038 CEP85Q6P2H3 762 aa21.04■□□□□ 0.96
CPSF4-203ENST00000430038 SCYL3Q8IZE3 742 aa21.04■□□□□ 0.96
CPSF4-203ENST00000430038 SH3RF3Q8TEJ3 882 aaPredicted RBP21.04■□□□□ 0.96
CPSF4-203ENST00000430038 ARMC5Q96C12 935 aa21.04■□□□□ 0.96
CPSF4-203ENST00000430038 CCDC8Q9H0W5 538 aaPredicted RBP21.04■□□□□ 0.96
CPSF4-203ENST00000430038 ATAD5Q96QE3 1844 aa21.04■□□□□ 0.96
CPSF4-203ENST00000430038 UQCRFS1P1P0C7P4 283 aa21.03■□□□□ 0.96
CPSF4-203ENST00000430038 ZAP70P43403 619 aa21.03■□□□□ 0.96
CPSF4-203ENST00000430038 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
CPSF4-203ENST00000430038 NDUFB9Q9Y6M9 179 aa21.03■□□□□ 0.96
CPSF4-203ENST00000430038 FOCADQ5VW36 1801 aa21.03■□□□□ 0.96
CPSF4-203ENST00000430038 MGAMO43451 1857 aa21.03■□□□□ 0.96
CPSF4-203ENST00000430038 DOCK3Q8IZD9 2030 aa21.02■□□□□ 0.96
CPSF4-203ENST00000430038 CXCL11O14625 94 aa21.02■□□□□ 0.96
CPSF4-203ENST00000430038 NPM3O75607 178 aaKnown RBP21.02■□□□□ 0.96
CPSF4-203ENST00000430038 CYP2C8P10632 490 aa21.02■□□□□ 0.96
CPSF4-203ENST00000430038 OS9Q13438 667 aaPredicted RBP21.02■□□□□ 0.96
CPSF4-203ENST00000430038 TTC39AQ5SRH9 613 aa21.02■□□□□ 0.96
CPSF4-203ENST00000430038 LRP2BPQ9P2M1 347 aa21.02■□□□□ 0.96
CPSF4-203ENST00000430038 MAST2Q6P0Q8 1798 aa21.01■□□□□ 0.95
CPSF4-203ENST00000430038 A0A0G2JLL6 359 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-203ENST00000430038 LDHCP07864 332 aa21.01■□□□□ 0.95
CPSF4-203ENST00000430038 EN2P19622 333 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-203ENST00000430038 PRRT2Q7Z6L0 340 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-203ENST00000430038 ZNF333Q96JL9 665 aa21.01■□□□□ 0.95
CPSF4-203ENST00000430038 TRIM47Q96LD4 638 aa21.01■□□□□ 0.95
CPSF4-203ENST00000430038 OSBPL5Q9H0X9 879 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-203ENST00000430038 TBC1D12O60347 775 aa21■□□□□ 0.95
CPSF4-203ENST00000430038 CTNND1O60716 968 aaKnown RBP21■□□□□ 0.95
CPSF4-203ENST00000430038 GSTO1P78417 241 aa21■□□□□ 0.95
CPSF4-203ENST00000430038 JAG1P78504 1218 aa21■□□□□ 0.95
CPSF4-203ENST00000430038 ZNF512BQ96KM6 892 aaPredicted RBP21■□□□□ 0.95
CPSF4-203ENST00000430038 AATFQ9NY61 560 aaKnown RBP eCLIP21■□□□□ 0.95
CPSF4-203ENST00000430038 EXOC6BQ9Y2D4 811 aa21■□□□□ 0.95
CPSF4-203ENST00000430038 CCDC158Q5M9N0 1113 aa20.99■□□□□ 0.95
CPSF4-203ENST00000430038 TEX11Q8IYF3 940 aa20.99■□□□□ 0.95
CPSF4-203ENST00000430038 SH3TC2Q8TF17 1288 aa20.99■□□□□ 0.95
CPSF4-203ENST00000430038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.99■□□□□ 0.95
CPSF4-203ENST00000430038 BCRP11274 1271 aa20.98■□□□□ 0.95
CPSF4-203ENST00000430038 DYNLL1P63167 89 aaKnown RBP20.98■□□□□ 0.95
CPSF4-203ENST00000430038 SHROOM1Q2M3G4 852 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms