RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
TTC3-208ENST00000428693 PDS5AQ29RF7 1337 aaKnown RBP14.78□□□□□ -0.04
TTC3-208ENST00000428693 DDTLA6NHG4 134 aaPredicted RBP14.78□□□□□ -0.04
TTC3-208ENST00000428693 PDHXO00330 501 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 TLR2O60603 784 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 UQCRFS1P1P0C7P4 283 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 SLC9C1Q4G0N8 1177 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 IDI2Q9BXS1 227 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 ARHGAP39Q9C0H5 1083 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
TTC3-208ENST00000428693 ZNF112Q9UJU3 913 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
TTC3-208ENST00000428693 SLURP2P0DP57 97 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 MCAMP43121 646 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 ATP8B2P98198 1209 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 CAP1Q01518 475 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 GADL1Q6ZQY3 521 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 SH3BP5LQ7L8J4 393 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 TMEM106CQ9BVX2 250 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 PTCH2Q9Y6C5 1203 aa14.77□□□□□ -0.05
TTC3-208ENST00000428693 GPR75-ASB3A0A0A6YYF3 556 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 FAM196BA6NMK8 535 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 ARID4AP29374 1257 aaPredicted RBP14.76□□□□□ -0.05
TTC3-208ENST00000428693 SLC4A8Q2Y0W8 1093 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 TNNI3KQ59H18 835 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 NOL9Q5SY16 702 aaKnown RBP14.76□□□□□ -0.05
TTC3-208ENST00000428693 ANKRD23Q86SG2 305 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 NBPF11Q86T75 865 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 SCYL3Q8IZE3 742 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 NSUN4Q96CB9 384 aaKnown RBP14.76□□□□□ -0.05
TTC3-208ENST00000428693 FAM163AQ96GL9 167 aaPredicted RBP14.76□□□□□ -0.05
TTC3-208ENST00000428693 DBNDD2Q9BQY9 259 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.76□□□□□ -0.05
TTC3-208ENST00000428693 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
TTC3-208ENST00000428693 FPGT-TNNI3KV9GXZ4 949 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 CENPFP49454 3210 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 DOCK2Q92608 1830 aa14.76□□□□□ -0.05
TTC3-208ENST00000428693 TRIM75PA6NK02 468 aa14.75□□□□□ -0.05
TTC3-208ENST00000428693 FMNL1O95466 1100 aaPredicted RBP14.75□□□□□ -0.05
TTC3-208ENST00000428693 RLBP1P12271 317 aa14.75□□□□□ -0.05
TTC3-208ENST00000428693 PTPRAP18433 802 aa14.75□□□□□ -0.05
TTC3-208ENST00000428693 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
TTC3-208ENST00000428693 POLA2Q14181 598 aa14.75□□□□□ -0.05
TTC3-208ENST00000428693 NAA16Q6N069 864 aaPredicted RBP14.75□□□□□ -0.05
TTC3-208ENST00000428693 SSH3Q8TE77 659 aa14.75□□□□□ -0.05
TTC3-208ENST00000428693 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.75□□□□□ -0.05
TTC3-208ENST00000428693 KCNH4Q9UQ05 1017 aa14.75□□□□□ -0.05
TTC3-208ENST00000428693 KIAA0100Q14667 2235 aaKnown RBP14.75□□□□□ -0.05
TTC3-208ENST00000428693 PHF20L1A8MW92 1017 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 CXCL11O14625 94 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 CYP2C8P10632 490 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 PSMC4P43686 418 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 RHBDL3P58872 404 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 CCDC84Q86UT8 332 aaPredicted RBP14.74□□□□□ -0.05
TTC3-208ENST00000428693 PANK1Q8TE04 598 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 SH3RF3Q8TEJ3 882 aaPredicted RBP14.74□□□□□ -0.05
TTC3-208ENST00000428693 SH3TC2Q8TF17 1288 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 ZNF384Q8TF68 577 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 PARK7Q99497 189 aaKnown RBP14.74□□□□□ -0.05
TTC3-208ENST00000428693 CCDC8Q9H0W5 538 aaPredicted RBP14.74□□□□□ -0.05
TTC3-208ENST00000428693 AATFQ9NY61 560 aaKnown RBP eCLIP14.74□□□□□ -0.05
TTC3-208ENST00000428693 HTTP42858 3142 aa14.74□□□□□ -0.05
TTC3-208ENST00000428693 CTNND1O60716 968 aaKnown RBP14.73□□□□□ -0.05
TTC3-208ENST00000428693 BAG3O95817 575 aa14.73□□□□□ -0.05
TTC3-208ENST00000428693 EN2P19622 333 aaPredicted RBP14.73□□□□□ -0.05
TTC3-208ENST00000428693 FASTKD5Q7L8L6 764 aaKnown RBP14.73□□□□□ -0.05
TTC3-208ENST00000428693 ARMC5Q96C12 935 aa14.73□□□□□ -0.05
TTC3-208ENST00000428693 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
TTC3-208ENST00000428693 ZSWIM8A7E2V4 1837 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 APBB1O00213 710 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 ZBTB7BO15156 539 aaPredicted RBP14.72□□□□□ -0.05
TTC3-208ENST00000428693 ZBTB22O15209 634 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 HOXD10P28358 340 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 ZAP70P43403 619 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 PRPF38BQ5VTL8 546 aaKnown RBP14.72□□□□□ -0.05
TTC3-208ENST00000428693 C17orf99Q6UX52 265 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 RAET1EQ8TD07 263 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 SMCR8Q8TEV9 937 aaPredicted RBP14.72□□□□□ -0.05
TTC3-208ENST00000428693 OSBPL5Q9H0X9 879 aaPredicted RBP14.72□□□□□ -0.05
TTC3-208ENST00000428693 GPR108Q9NPR9 543 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 BIN2Q9UBW5 565 aaPredicted RBP14.72□□□□□ -0.05
TTC3-208ENST00000428693 EXOC6BQ9Y2D4 811 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 RFX7Q2KHR2 1363 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 ATRNL1Q5VV63 1379 aa14.72□□□□□ -0.05
TTC3-208ENST00000428693 ZBED9Q6R2W3 1325 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 IDH1O75874 414 aaKnown RBP14.71□□□□□ -0.05
TTC3-208ENST00000428693 MOGSQ13724 837 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 GPAT2Q6NUI2 795 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 MAPKAPK5Q8IW41 473 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 ZNF333Q96JL9 665 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
TTC3-208ENST00000428693 AFG3L2Q9Y4W6 797 aa14.71□□□□□ -0.05
TTC3-208ENST00000428693 A0A0G2JLL6 359 aaPredicted RBP14.7□□□□□ -0.06
TTC3-208ENST00000428693 MAP4K4O95819 1239 aaPredicted RBP14.7□□□□□ -0.06
TTC3-208ENST00000428693 GNRH1P01148 92 aa14.7□□□□□ -0.06
TTC3-208ENST00000428693 CYP2E1P05181 493 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms