RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 NOP58Q9Y2X3 529 aaKnown RBP33.54■■■□□ 2.96
LMO1-202ENST00000428101 BTBD19C9JJ37 291 aa33.53■■■□□ 2.96
LMO1-202ENST00000428101 UQCRFS1P1P0C7P4 283 aa33.53■■■□□ 2.96
LMO1-202ENST00000428101 RHBDL3P58872 404 aa33.53■■■□□ 2.96
LMO1-202ENST00000428101 NOL9Q5SY16 702 aaKnown RBP33.53■■■□□ 2.96
LMO1-202ENST00000428101 TNRC18O15417 2968 aaPredicted RBP33.52■■■□□ 2.96
LMO1-202ENST00000428101 OS9Q13438 667 aaPredicted RBP33.52■■■□□ 2.96
LMO1-202ENST00000428101 DDTLA6NHG4 134 aaPredicted RBP33.51■■■□□ 2.95
LMO1-202ENST00000428101 PHF20L1A8MW92 1017 aa33.51■■■□□ 2.95
LMO1-202ENST00000428101 PANK1Q8TE04 598 aa33.51■■■□□ 2.95
LMO1-202ENST00000428101 DBNDD2Q9BQY9 259 aa33.51■■■□□ 2.95
LMO1-202ENST00000428101 ZCCHC17Q9NP64 241 aaKnown RBP33.51■■■□□ 2.95
LMO1-202ENST00000428101 CENPFP49454 3210 aa33.5■■■□□ 2.95
LMO1-202ENST00000428101 MAP3K10Q02779 954 aa33.5■■■□□ 2.95
LMO1-202ENST00000428101 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.5■■■□□ 2.95
LMO1-202ENST00000428101 GSTO1P78417 241 aa33.49■■■□□ 2.95
LMO1-202ENST00000428101 PICALMQ13492 652 aa33.49■■■□□ 2.95
LMO1-202ENST00000428101 RAI14Q9P0K7 980 aa33.49■■■□□ 2.95
LMO1-202ENST00000428101 KCNH4Q9UQ05 1017 aa33.49■■■□□ 2.95
LMO1-202ENST00000428101 SLURP2P0DP57 97 aa33.48■■■□□ 2.95
LMO1-202ENST00000428101 CEP85Q6P2H3 762 aa33.48■■■□□ 2.95
LMO1-202ENST00000428101 ZSCAN29Q8IWY8 852 aaPredicted RBP33.48■■■□□ 2.95
LMO1-202ENST00000428101 EFCC1Q9HA90 598 aa33.48■■■□□ 2.95
LMO1-202ENST00000428101 PTPN22Q9Y2R2 807 aa33.48■■■□□ 2.95
LMO1-202ENST00000428101 LDHCP07864 332 aa33.47■■■□□ 2.95
LMO1-202ENST00000428101 TTC39AQ5SRH9 613 aa33.47■■■□□ 2.95
LMO1-202ENST00000428101 SNRKQ9NRH2 765 aa33.47■■■□□ 2.95
LMO1-202ENST00000428101 NPM3O75607 178 aaKnown RBP33.46■■■□□ 2.95
LMO1-202ENST00000428101 CCDC158Q5M9N0 1113 aa33.46■■■□□ 2.95
LMO1-202ENST00000428101 LRP2BPQ9P2M1 347 aa33.46■■■□□ 2.95
LMO1-202ENST00000428101 TLR2O60603 784 aa33.45■■■□□ 2.95
LMO1-202ENST00000428101 MOGSQ13724 837 aa33.45■■■□□ 2.95
LMO1-202ENST00000428101 MYO5AQ9Y4I1 1855 aaKnown RBP33.44■■■□□ 2.94
LMO1-202ENST00000428101 ZNF512BQ96KM6 892 aaPredicted RBP33.44■■■□□ 2.94
LMO1-202ENST00000428101 DBNLQ9UJU6 430 aaKnown RBP33.44■■■□□ 2.94
LMO1-202ENST00000428101 MAP4K4O95819 1239 aaPredicted RBP33.43■■■□□ 2.94
LMO1-202ENST00000428101 SCYL3Q8IZE3 742 aa33.43■■■□□ 2.94
LMO1-202ENST00000428101 TLR7Q9NYK1 1049 aaKnown RBP33.43■■■□□ 2.94
LMO1-202ENST00000428101 CYP2E1P05181 493 aaPredicted RBP33.42■■■□□ 2.94
LMO1-202ENST00000428101 ANKRD23Q86SG2 305 aa33.42■■■□□ 2.94
LMO1-202ENST00000428101 EAF2Q96CJ1 260 aaPredicted RBP33.42■■■□□ 2.94
LMO1-202ENST00000428101 PTPRAP18433 802 aa33.41■■■□□ 2.94
LMO1-202ENST00000428101 CCDC8Q9H0W5 538 aaPredicted RBP33.41■■■□□ 2.94
LMO1-202ENST00000428101 CXCL11O14625 94 aa33.4■■■□□ 2.94
LMO1-202ENST00000428101 TBC1D12O60347 775 aa33.4■■■□□ 2.94
LMO1-202ENST00000428101 DOCK1Q14185 1865 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 MAST2Q6P0Q8 1798 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 PDHXO00330 501 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 PICK1Q9NRD5 415 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 ZHX2Q9Y6X8 837 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 ZSWIM8A7E2V4 1837 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 PHIPQ8WWQ0 1821 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 PDE4DIPQ5VU43 2346 aa33.39■■■□□ 2.94
LMO1-202ENST00000428101 CTNND1O60716 968 aaKnown RBP33.38■■■□□ 2.93
LMO1-202ENST00000428101 ZAP70P43403 619 aa33.38■■■□□ 2.93
LMO1-202ENST00000428101 NAA16Q6N069 864 aaPredicted RBP33.38■■■□□ 2.93
LMO1-202ENST00000428101 C17orf99Q6UX52 265 aa33.38■■■□□ 2.93
LMO1-202ENST00000428101 SH3RF3Q8TEJ3 882 aaPredicted RBP33.38■■■□□ 2.93
LMO1-202ENST00000428101 OSBPL5Q9H0X9 879 aaPredicted RBP33.38■■■□□ 2.93
LMO1-202ENST00000428101 EXOC6BQ9Y2D4 811 aa33.38■■■□□ 2.93
LMO1-202ENST00000428101 AFG3L2Q9Y4W6 797 aa33.38■■■□□ 2.93
LMO1-202ENST00000428101 COL2A1P02458 1487 aaPredicted RBP33.37■■■□□ 2.93
LMO1-202ENST00000428101 MS4A1P11836 297 aa33.37■■■□□ 2.93
LMO1-202ENST00000428101 LACTBP83111 547 aaPredicted RBP33.37■■■□□ 2.93
LMO1-202ENST00000428101 ARHGEF6Q15052 776 aa33.37■■■□□ 2.93
LMO1-202ENST00000428101 GPAT2Q6NUI2 795 aa33.37■■■□□ 2.93
LMO1-202ENST00000428101 TEX11Q8IYF3 940 aa33.37■■■□□ 2.93
LMO1-202ENST00000428101 ARHGAP39Q9C0H5 1083 aa33.37■■■□□ 2.93
LMO1-202ENST00000428101 PTPRFP10586 1907 aa33.36■■■□□ 2.93
LMO1-202ENST00000428101 ADGRA2Q96PE1 1338 aa33.36■■■□□ 2.93
LMO1-202ENST00000428101 ADGRA1Q86SQ6 560 aa33.36■■■□□ 2.93
LMO1-202ENST00000428101 PIH1D3Q9NQM4 214 aaKnown RBP33.36■■■□□ 2.93
LMO1-202ENST00000428101 AATFQ9NY61 560 aaKnown RBP eCLIP33.36■■■□□ 2.93
LMO1-202ENST00000428101 BRCA2P51587 3418 aa33.35■■■□□ 2.93
LMO1-202ENST00000428101 A0A0G2JLL6 359 aaPredicted RBP33.35■■■□□ 2.93
LMO1-202ENST00000428101 FAM196BA6NMK8 535 aa33.35■■■□□ 2.93
LMO1-202ENST00000428101 PRRT2Q7Z6L0 340 aaPredicted RBP33.35■■■□□ 2.93
LMO1-202ENST00000428101 ARMC5Q96C12 935 aa33.35■■■□□ 2.93
LMO1-202ENST00000428101 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.35■■■□□ 2.93
LMO1-202ENST00000428101 CPA4Q9UI42 421 aa33.35■■■□□ 2.93
LMO1-202ENST00000428101 CDK5RAP2Q96SN8 1893 aa33.35■■■□□ 2.93
LMO1-202ENST00000428101 PPP4CP60510 307 aa33.34■■■□□ 2.93
LMO1-202ENST00000428101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.34■■■□□ 2.93
LMO1-202ENST00000428101 KIAA0100Q14667 2235 aaKnown RBP33.33■■■□□ 2.93
LMO1-202ENST00000428101 BAG3O95817 575 aa33.33■■■□□ 2.93
LMO1-202ENST00000428101 NOL10Q9BSC4 688 aaKnown RBP33.33■■■□□ 2.93
LMO1-202ENST00000428101 PTCH2Q9Y6C5 1203 aa33.33■■■□□ 2.93
LMO1-202ENST00000428101 IGSF3O75054 1194 aa33.32■■■□□ 2.92
LMO1-202ENST00000428101 ERC1Q8IUD2 1116 aa33.32■■■□□ 2.92
LMO1-202ENST00000428101 COG6Q9Y2V7 657 aa33.32■■■□□ 2.92
LMO1-202ENST00000428101 FOCADQ5VW36 1801 aa33.31■■■□□ 2.92
LMO1-202ENST00000428101 KIF22Q14807 665 aa33.31■■■□□ 2.92
LMO1-202ENST00000428101 FASTKD5Q7L8L6 764 aaKnown RBP33.31■■■□□ 2.92
LMO1-202ENST00000428101 CCDC84Q86UT8 332 aaPredicted RBP33.31■■■□□ 2.92
LMO1-202ENST00000428101 ZBTB40Q9NUA8 1239 aa33.31■■■□□ 2.92
LMO1-202ENST00000428101 SIPA1L1O43166 1804 aa33.3■■■□□ 2.92
LMO1-202ENST00000428101 MKI67P46013 3256 aaKnown RBP33.3■■■□□ 2.92
LMO1-202ENST00000428101 POTEFA5A3E0 1075 aa33.3■■■□□ 2.92
LMO1-202ENST00000428101 PLCG2P16885 1265 aa33.3■■■□□ 2.92
LMO1-202ENST00000428101 CTGFP29279 349 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms