RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 CCT6BQ92526 530 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 CCDC171Q6TFL3 1326 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
CLTCL1-202ENST00000427926 ADCY7P51828 1080 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 AGTPBP1Q9UPW5 1226 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 STK25O00506 426 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 GABPB2Q8TAK5 448 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 CGNQ9P2M7 1197 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 SERPINA10Q9UK55 444 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 E7EVH7 732 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 CRCPO75575 148 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 PDE1AP54750 535 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 PDE4DQ08499 809 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 RSPH3Q86UC2 560 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 CEP112Q8N8E3 955 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 MRPS27Q92552 414 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 ALAS1P13196 640 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 PSMC4P43686 418 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 FAM204AQ9H8W3 233 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
CLTCL1-202ENST00000427926 CCNT1O60563 726 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 PRDM1O75626 825 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 STK10O94804 968 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 TERF1P54274 439 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 NEMFO60524 1076 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 CSPG5O95196 566 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 KCNG1Q9UIX4 513 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 ERVV-2B6SEH9 535 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 P4HA1P13674 534 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 ELMSAN1Q6PJG2 1045 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 OTUD6AQ7L8S5 288 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 HELLSQ9NRZ9 838 aa11.15□□□□□ -0.62
CLTCL1-202ENST00000427926 GEN1Q17RS7 908 aa11.15□□□□□ -0.63
CLTCL1-202ENST00000427926 MAP7D1Q3KQU3 841 aa11.15□□□□□ -0.63
CLTCL1-202ENST00000427926 ZBTB33Q86T24 672 aa11.15□□□□□ -0.63
CLTCL1-202ENST00000427926 PAIP2Q9BPZ3 127 aaKnown RBP11.15□□□□□ -0.63
CLTCL1-202ENST00000427926 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-202ENST00000427926 SCNN1DP51172 638 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 HSP90AA4PQ58FG1 418 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 TESK2Q96S53 571 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 PIK3C2GO75747 1445 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 ZNF165P49910 485 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 PLCD1P51178 756 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 TIMM10P62072 90 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 INF2Q27J81 1249 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 SPECC1LQ69YQ0 1117 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 IQUBQ8NA54 791 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 ADPGKQ9BRR6 497 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 MED10Q9BTT4 135 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 TRMT1Q9NXH9 659 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 FLOT1O75955 427 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 DEPTORQ8TB45 409 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 PFDN4Q9NQP4 134 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 SDSP20132 328 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 YARSP54577 528 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 UBASH3AP57075 661 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 MXRA7P84157 204 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLTCL1-202ENST00000427926 CHD1O14646 1710 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 TRAF5O00463 557 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 IGHDP01880 384 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 PTGS1P23219 599 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 LIN9Q5TKA1 542 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 ZBTB8OSQ8IWT0 167 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 STIM2Q9P246 746 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 B4E1Z4 1266 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 SPTLC2O15270 562 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 CD19P15391 556 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 TMOD1P28289 359 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 SPATA5Q8NB90 893 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 TACC1O75410 805 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 CAVIN2O95810 425 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 OATP04181 439 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 ZNF174Q15697 407 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 VWA3AA6NCI4 1184 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms