RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 NTRK3Q16288 839 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 FBXL16Q8N461 479 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
ERCC3-202ENST00000426778 KCNH3Q9ULD8 1083 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 PKD1L3Q7Z443 1732 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
ERCC3-202ENST00000426778 ADKP55263 362 aaKnown RBP16.56■□□□□ 0.24
ERCC3-202ENST00000426778 CTSWP56202 376 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 MYL5Q02045 173 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 UTP14CQ5TAP6 766 aaKnown RBP16.56■□□□□ 0.24
ERCC3-202ENST00000426778 BRINP3Q76B58 766 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 SLC12A7Q9Y666 1083 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 URI1O94763 535 aaPredicted RBP16.56■□□□□ 0.24
ERCC3-202ENST00000426778 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 NAPBQ9H115 298 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 SEC31BQ9NQW1 1179 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 FAM205CA6NFA0 338 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
ERCC3-202ENST00000426778 SYCP1Q15431 976 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 SLC4A9Q96Q91 983 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 STRBPQ96SI9 672 aaKnown RBP16.55■□□□□ 0.24
ERCC3-202ENST00000426778 INTS13Q9NVM9 706 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 HPSEQ9Y251 543 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 WTIPA6NIX2 430 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-202ENST00000426778 PDE8BO95263 885 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
ERCC3-202ENST00000426778 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 IFNL3Q8IZI9 196 aa16.55■□□□□ 0.24
ERCC3-202ENST00000426778 GTPBP4Q9BZE4 634 aaKnown RBP16.55■□□□□ 0.24
ERCC3-202ENST00000426778 ERICH4A6NGS2 130 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
ERCC3-202ENST00000426778 TOB1P50616 345 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-202ENST00000426778 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
ERCC3-202ENST00000426778 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
ERCC3-202ENST00000426778 KRBA2Q6ZNG9 492 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 DIS3L2Q8IYB7 885 aaKnown RBP16.54■□□□□ 0.24
ERCC3-202ENST00000426778 BPIFA3Q9BQP9 254 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 RASGRF1Q13972 1273 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 RESP18Q5W5W9 173 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 SERTAD1Q9UHV2 236 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
ERCC3-202ENST00000426778 MAP3K15Q6ZN16 1313 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 VGLL2Q8N8G2 317 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 MYH7P12883 1935 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 CDK11BP21127 795 aaKnown RBP16.53■□□□□ 0.24
ERCC3-202ENST00000426778 SSRP1Q08945 709 aaKnown RBP16.53■□□□□ 0.24
ERCC3-202ENST00000426778 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 LCORLQ8N3X6 602 aa16.53■□□□□ 0.24
ERCC3-202ENST00000426778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■■■□ 21.3
ERCC3-202ENST00000426778 TCRBV5S4A2TA0A5A2 114 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 SEC31AO94979 1220 aaKnown RBP16.52■□□□□ 0.24
ERCC3-202ENST00000426778 TDO2P48775 406 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 BCAMP50895 628 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 STX17P56962 302 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 CARD6Q9BX69 1037 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 SAMSN1Q9NSI8 373 aaKnown RBP16.52■□□□□ 0.24
ERCC3-202ENST00000426778 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.24
ERCC3-202ENST00000426778 GOLGB1Q14789 3259 aaKnown RBP16.52■□□□□ 0.24
ERCC3-202ENST00000426778 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 PRDM1O75626 825 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 CDKL5O76039 1030 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 STARD3NLO95772 234 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 JMYQ8N9B5 988 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 STAMQ92783 540 aa16.52■□□□□ 0.24
ERCC3-202ENST00000426778 CLCN6P51797 869 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 TOGARAM2Q6ZUX3 1019 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 NOSTRINQ8IVI9 506 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 KRT222Q8N1A0 295 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 SPATA5Q8NB90 893 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 CPLX3Q8WVH0 158 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 IRX2Q9BZI1 471 aaPredicted RBP16.52■□□□□ 0.23
ERCC3-202ENST00000426778 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 NFE2L3Q9Y4A8 694 aa16.52■□□□□ 0.23
ERCC3-202ENST00000426778 A0A0U1RQJ8 604 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 IKBKBO14920 756 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 AFMP43652 599 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 ETF1P62495 437 aaKnown RBP16.51■□□□□ 0.23
ERCC3-202ENST00000426778 MTF1Q14872 753 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 KARSQ15046 597 aaKnown RBP16.51■□□□□ 0.23
ERCC3-202ENST00000426778 TRIM65Q6PJ69 517 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 SMYD4Q8IYR2 804 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-202ENST00000426778 ATRIPQ8WXE1 791 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 CABP5Q9NP86 173 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 NRDCO43847 1150 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 PPP6R2O75170 966 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 VSTM4Q8IW00 320 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
ERCC3-202ENST00000426778 WDR24Q96S15 920 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms