RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 RASSF7Q02833 373 aa8.49□□□□□ -1.05
LSM8-204ENST00000424702 CCDC17Q96LX7 622 aa8.49□□□□□ -1.05
LSM8-204ENST00000424702 TCEANC2Q96MN5 208 aa8.49□□□□□ -1.05
LSM8-204ENST00000424702 ARMT1Q9H993 441 aa8.49□□□□□ -1.05
LSM8-204ENST00000424702 ARHGEF10LQ9HCE6 1279 aa8.49□□□□□ -1.05
LSM8-204ENST00000424702 ADARB2Q9NS39 739 aaKnown RBP8.49□□□□□ -1.05
LSM8-204ENST00000424702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.49□□□□□ -1.05
LSM8-204ENST00000424702 NUP98P52948 1817 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 SNAP23O00161 211 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 KIF5BP33176 963 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 AMIGO3Q86WK7 504 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 TRIM22Q8IYM9 498 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 CNOT7Q9UIV1 285 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 ANKRD36CQ5JPF3 1778 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 TSPY3P0CV98 308 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 TSPY8P0CW00 308 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 HSPD1P10809 573 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 CPA1P15085 419 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 VEGFAP15692 232 aaPredicted RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 MCM5P33992 734 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 GNAQP50148 359 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 MCTP1Q6DN14 999 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 RASEFQ8IZ41 740 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 NLGN2Q8NFZ4 835 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 CTCFLQ8NI51 663 aaPredicted RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 DDX49Q9Y6V7 483 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 PSMD14O00487 310 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 IREB2P48200 963 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 MECOMQ03112 1051 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 LARP1BQ659C4 914 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 DHX32Q7L7V1 743 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 INTS4Q96HW7 963 aaKnown RBP8.48□□□□□ -1.05
LSM8-204ENST00000424702 PPP2R3BQ9Y5P8 575 aa8.48□□□□□ -1.05
LSM8-204ENST00000424702 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
LSM8-204ENST00000424702 Q6ZUG5 572 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 CATIPQ7Z7H3 387 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 BRF1Q92994 677 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 ENTPD3O75355 529 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 MCM4P33991 863 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 PABPC4Q13310 644 aaKnown RBP eCLIP8.47□□□□□ -1.051e-11■■□□□ 13.9
LSM8-204ENST00000424702 SCARF1Q14162 830 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 NECTIN1Q15223 517 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 FOXP4Q8IVH2 680 aaPredicted RBP8.47□□□□□ -1.05
LSM8-204ENST00000424702 KAT14Q9H8E8 782 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 DUOX1Q9NRD9 1551 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 UBR3Q6ZT12 1888 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 IFIT3O14879 490 aaKnown RBP8.47□□□□□ -1.05
LSM8-204ENST00000424702 CYP2E1P05181 493 aaPredicted RBP8.47□□□□□ -1.05
LSM8-204ENST00000424702 PTGER2P43116 358 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 MAPKAPK5Q8IW41 473 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 TGFBRAP1Q8WUH2 860 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 WASF1Q92558 559 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 OSBP2Q969R2 916 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 SYAP1Q96A49 352 aaPredicted RBP8.47□□□□□ -1.05
LSM8-204ENST00000424702 PIH1D3Q9NQM4 214 aaKnown RBP8.47□□□□□ -1.05
LSM8-204ENST00000424702 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
LSM8-204ENST00000424702 MYH14Q7Z406 1995 aaKnown RBP8.46□□□□□ -1.05
LSM8-204ENST00000424702 CALM1P0DP23 149 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 CALM2P0DP24 149 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 CALM3P0DP25 149 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 CXCL9Q07325 125 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 CCDC96Q2M329 555 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 KIF2CQ99661 725 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 PDGFDQ9GZP0 370 aaPredicted RBP8.46□□□□□ -1.05
LSM8-204ENST00000424702 ZSWIM6Q9HCJ5 1215 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 PNMA2Q9UL42 364 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 RREB1Q92766 1687 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 M0R2C6 588 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 C2orf69Q8N8R5 385 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 TNPO1Q92973 898 aaKnown RBP8.46□□□□□ -1.05
LSM8-204ENST00000424702 LRRC2Q9BYS8 371 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 ZNF408Q9H9D4 720 aa8.46□□□□□ -1.05
LSM8-204ENST00000424702 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.05
LSM8-204ENST00000424702 TCP10L2B9ZVM9 353 aa8.46□□□□□ -1.06
LSM8-204ENST00000424702 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
LSM8-204ENST00000424702 TBC1D10BQ4KMP7 808 aaPredicted RBP8.46□□□□□ -1.06
LSM8-204ENST00000424702 MRIQ9BWK5 157 aa8.46□□□□□ -1.06
LSM8-204ENST00000424702 ZNF341Q9BYN7 854 aa8.46□□□□□ -1.06
LSM8-204ENST00000424702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.46□□□□□ -1.06
LSM8-204ENST00000424702 BCORQ6W2J9 1755 aa8.46□□□□□ -1.06
LSM8-204ENST00000424702 N4BP2Q86UW6 1770 aaPredicted RBP8.46□□□□□ -1.06
LSM8-204ENST00000424702 USP50Q70EL3 339 aaPredicted RBP8.45□□□□□ -1.06
LSM8-204ENST00000424702 NECAB1Q8N987 351 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 GINM1Q9NU53 330 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 PI4KBQ9UBF8 816 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 TAF1LQ8IZX4 1826 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 NUP188Q5SRE5 1749 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 PRC1O43663 620 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 FOSBP53539 338 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 ADCK5Q3MIX3 580 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 TMEM67Q5HYA8 995 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 OTUD7BQ6GQQ9 843 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 VGLL2Q8N8G2 317 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 PUS7LQ9H0K6 701 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms