RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PPATQ06203 517 aa22.69■■□□□ 1.22
NUP50-207ENST00000424634 CCDC158Q5M9N0 1113 aa22.69■■□□□ 1.22
NUP50-207ENST00000424634 TTC39AQ5SRH9 613 aa22.69■■□□□ 1.22
NUP50-207ENST00000424634 EAF2Q96CJ1 260 aaPredicted RBP22.69■■□□□ 1.22
NUP50-207ENST00000424634 CCDC8Q9H0W5 538 aaPredicted RBP22.69■■□□□ 1.22
NUP50-207ENST00000424634 TLR7Q9NYK1 1049 aaKnown RBP22.69■■□□□ 1.22
NUP50-207ENST00000424634 DBNLQ9UJU6 430 aaKnown RBP22.69■■□□□ 1.22
NUP50-207ENST00000424634 HTTP42858 3142 aa22.68■■□□□ 1.22
NUP50-207ENST00000424634 LDHCP07864 332 aa22.68■■□□□ 1.22
NUP50-207ENST00000424634 CETPP11597 493 aa22.68■■□□□ 1.22
NUP50-207ENST00000424634 GSTO1P78417 241 aa22.68■■□□□ 1.22
NUP50-207ENST00000424634 PICALMQ13492 652 aa22.68■■□□□ 1.22
NUP50-207ENST00000424634 FBXO46Q6PJ61 603 aaPredicted RBP22.68■■□□□ 1.22
NUP50-207ENST00000424634 LRP2BPQ9P2M1 347 aa22.68■■□□□ 1.22
NUP50-207ENST00000424634 BTBD19C9JJ37 291 aa22.67■■□□□ 1.22
NUP50-207ENST00000424634 CYP2E1P05181 493 aaPredicted RBP22.67■■□□□ 1.22
NUP50-207ENST00000424634 SNAPC2Q13487 334 aa22.67■■□□□ 1.22
NUP50-207ENST00000424634 TAF1CQ15572 869 aaPredicted RBP22.67■■□□□ 1.22
NUP50-207ENST00000424634 NOL9Q5SY16 702 aaKnown RBP22.67■■□□□ 1.22
NUP50-207ENST00000424634 OTOP1Q7RTM1 612 aa22.67■■□□□ 1.22
NUP50-207ENST00000424634 ZSCAN29Q8IWY8 852 aaPredicted RBP22.67■■□□□ 1.22
NUP50-207ENST00000424634 CD99L2Q8TCZ2 262 aa22.67■■□□□ 1.22
NUP50-207ENST00000424634 ZNF512BQ96KM6 892 aaPredicted RBP22.67■■□□□ 1.22
NUP50-207ENST00000424634 EXOC6BQ9Y2D4 811 aa22.67■■□□□ 1.22
NUP50-207ENST00000424634 MS4A1P11836 297 aa22.66■■□□□ 1.22
NUP50-207ENST00000424634 SOX10P56693 466 aa22.66■■□□□ 1.22
NUP50-207ENST00000424634 SP3Q02447 781 aa22.66■■□□□ 1.22
NUP50-207ENST00000424634 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.66■■□□□ 1.22
NUP50-207ENST00000424634 RCAN3Q9UKA8 241 aa22.66■■□□□ 1.22
NUP50-207ENST00000424634 COG6Q9Y2V7 657 aa22.66■■□□□ 1.22
NUP50-207ENST00000424634 TRIM17Q9Y577 477 aa22.66■■□□□ 1.22
NUP50-207ENST00000424634 TNRC18O15417 2968 aaPredicted RBP22.65■■□□□ 1.22
NUP50-207ENST00000424634 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
NUP50-207ENST00000424634 ZAP70P43403 619 aa22.65■■□□□ 1.22
NUP50-207ENST00000424634 MLLT1Q03111 559 aaPredicted RBP22.65■■□□□ 1.22
NUP50-207ENST00000424634 ZFYVE28Q9HCC9 887 aa22.65■■□□□ 1.22
NUP50-207ENST00000424634 KCNH4Q9UQ05 1017 aa22.65■■□□□ 1.22
NUP50-207ENST00000424634 MOGSQ13724 837 aa22.64■■□□□ 1.21
NUP50-207ENST00000424634 SIRT2Q8IXJ6 389 aa22.64■■□□□ 1.21
NUP50-207ENST00000424634 ERO1AQ96HE7 468 aa22.64■■□□□ 1.21
NUP50-207ENST00000424634 PIH1D3Q9NQM4 214 aaKnown RBP22.64■■□□□ 1.21
NUP50-207ENST00000424634 ZBTB40Q9NUA8 1239 aa22.64■■□□□ 1.21
NUP50-207ENST00000424634 CENPFP49454 3210 aa22.64■■□□□ 1.21
NUP50-207ENST00000424634 MAP4K4O95819 1239 aaPredicted RBP22.63■■□□□ 1.21
NUP50-207ENST00000424634 ADGRA1Q86SQ6 560 aa22.63■■□□□ 1.21
NUP50-207ENST00000424634 SH3RF3Q8TEJ3 882 aaPredicted RBP22.63■■□□□ 1.21
NUP50-207ENST00000424634 NAA16Q6N069 864 aaPredicted RBP22.62■■□□□ 1.21
NUP50-207ENST00000424634 SCYL3Q8IZE3 742 aa22.62■■□□□ 1.21
NUP50-207ENST00000424634 ZCCHC17Q9NP64 241 aaKnown RBP22.62■■□□□ 1.21
NUP50-207ENST00000424634 DDX19BQ9UMR2 479 aa22.62■■□□□ 1.21
NUP50-207ENST00000424634 TLR2O60603 784 aa22.61■■□□□ 1.21
NUP50-207ENST00000424634 TEX11Q8IYF3 940 aa22.61■■□□□ 1.21
NUP50-207ENST00000424634 OSBPL5Q9H0X9 879 aaPredicted RBP22.61■■□□□ 1.21
NUP50-207ENST00000424634 EFCC1Q9HA90 598 aa22.61■■□□□ 1.21
NUP50-207ENST00000424634 AATFQ9NY61 560 aaKnown RBP eCLIP22.61■■□□□ 1.21
NUP50-207ENST00000424634 NDUFB9Q9Y6M9 179 aa22.61■■□□□ 1.21
NUP50-207ENST00000424634 ZHX2Q9Y6X8 837 aa22.61■■□□□ 1.21
NUP50-207ENST00000424634 FAM196BA6NMK8 535 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 TBC1D12O60347 775 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 PTPRAP18433 802 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 PPP4CP60510 307 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 C20orf194Q5TEA3 1177 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 ANKRD23Q86SG2 305 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 AACSQ86V21 672 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 ERC1Q8IUD2 1116 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 RPAP2Q8IXW5 612 aaPredicted RBP22.6■■□□□ 1.21
NUP50-207ENST00000424634 IL1RAPL2Q9NP60 686 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 PTPN22Q9Y2R2 807 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 MAST2Q6P0Q8 1798 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 CDK5RAP2Q96SN8 1893 aa22.6■■□□□ 1.21
NUP50-207ENST00000424634 PHIPQ8WWQ0 1821 aa22.59■■□□□ 1.21
NUP50-207ENST00000424634 CXCL11O14625 94 aa22.59■■□□□ 1.21
NUP50-207ENST00000424634 CTNND1O60716 968 aaKnown RBP22.59■■□□□ 1.21
NUP50-207ENST00000424634 RHPN1Q8TCX5 695 aa22.59■■□□□ 1.21
NUP50-207ENST00000424634 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.59■■□□□ 1.21
NUP50-207ENST00000424634 AFG3L2Q9Y4W6 797 aa22.59■■□□□ 1.21
NUP50-207ENST00000424634 DOCK1Q14185 1865 aa22.58■■□□□ 1.21
NUP50-207ENST00000424634 PDHXO00330 501 aa22.58■■□□□ 1.21
NUP50-207ENST00000424634 GPAT2Q6NUI2 795 aa22.58■■□□□ 1.21
NUP50-207ENST00000424634 ANTXR1Q9H6X2 564 aa22.58■■□□□ 1.21
NUP50-207ENST00000424634 PICK1Q9NRD5 415 aa22.58■■□□□ 1.21
NUP50-207ENST00000424634 COL2A1P02458 1487 aaPredicted RBP22.58■■□□□ 1.2
NUP50-207ENST00000424634 ZSWIM8A7E2V4 1837 aa22.57■■□□□ 1.2
NUP50-207ENST00000424634 BAG3O95817 575 aa22.57■■□□□ 1.2
NUP50-207ENST00000424634 RRP1BQ14684 758 aaKnown RBP22.57■■□□□ 1.2
NUP50-207ENST00000424634 HSP90AB4PQ58FF6 505 aa22.57■■□□□ 1.2
NUP50-207ENST00000424634 C17orf99Q6UX52 265 aa22.57■■□□□ 1.2
NUP50-207ENST00000424634 CCDC84Q86UT8 332 aaPredicted RBP22.57■■□□□ 1.2
NUP50-207ENST00000424634 NOL10Q9BSC4 688 aaKnown RBP22.57■■□□□ 1.2
NUP50-207ENST00000424634 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.57■■□□□ 1.2
NUP50-207ENST00000424634 APBB1O00213 710 aa22.56■■□□□ 1.2
NUP50-207ENST00000424634 DYNLL1P63167 89 aaKnown RBP22.56■■□□□ 1.2
NUP50-207ENST00000424634 TGFBRAP1Q8WUH2 860 aa22.56■■□□□ 1.2
NUP50-207ENST00000424634 ARHGAP39Q9C0H5 1083 aa22.56■■□□□ 1.2
NUP50-207ENST00000424634 PTPRFP10586 1907 aa22.56■■□□□ 1.2
NUP50-207ENST00000424634 ADGRA2Q96PE1 1338 aa22.56■■□□□ 1.2
NUP50-207ENST00000424634 SIPA1L1O43166 1804 aa22.55■■□□□ 1.2
NUP50-207ENST00000424634 FOCADQ5VW36 1801 aa22.55■■□□□ 1.2
NUP50-207ENST00000424634 A0A0G2JLL6 359 aaPredicted RBP22.55■■□□□ 1.2
NUP50-207ENST00000424634 IGSF3O75054 1194 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms