RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 WDHD1O75717 1129 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-211ENST00000420363 ZBTB48P10074 688 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-211ENST00000420363 RHBDL3P58872 404 aa26.05■■□□□ 1.76
CPNE1-211ENST00000420363 NAA16Q6N069 864 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-211ENST00000420363 R3HDMLQ9H3Y0 253 aa26.05■■□□□ 1.76
CPNE1-211ENST00000420363 PIH1D3Q9NQM4 214 aaKnown RBP26.05■■□□□ 1.76
CPNE1-211ENST00000420363 FOCADQ5VW36 1801 aa26.04■■□□□ 1.76
CPNE1-211ENST00000420363 TTF1Q15361 905 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-211ENST00000420363 DCAF15Q66K64 600 aa26.04■■□□□ 1.76
CPNE1-211ENST00000420363 WNK4Q96J92 1243 aa26.04■■□□□ 1.76
CPNE1-211ENST00000420363 RGS3P49796 1198 aa26.03■■□□□ 1.76
CPNE1-211ENST00000420363 IFNL1Q8IU54 200 aa26.03■■□□□ 1.76
CPNE1-211ENST00000420363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.03■■□□□ 1.76
CPNE1-211ENST00000420363 NOL10Q9BSC4 688 aaKnown RBP26.03■■□□□ 1.76
CPNE1-211ENST00000420363 AK9Q5TCS8 1911 aa26.03■■□□□ 1.76
CPNE1-211ENST00000420363 CDK5RAP2Q96SN8 1893 aa26.02■■□□□ 1.76
CPNE1-211ENST00000420363 PLCG2P16885 1265 aa26.02■■□□□ 1.76
CPNE1-211ENST00000420363 ATP5JP18859 108 aa26.02■■□□□ 1.76
CPNE1-211ENST00000420363 TCP10Q12799 353 aa26.02■■□□□ 1.76
CPNE1-211ENST00000420363 FBXO46Q6PJ61 603 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-211ENST00000420363 ATRNL1Q5VV63 1379 aa26.02■■□□□ 1.76
CPNE1-211ENST00000420363 IDH1O75874 414 aaKnown RBP26.01■■□□□ 1.75
CPNE1-211ENST00000420363 BAG3O95817 575 aa26.01■■□□□ 1.75
CPNE1-211ENST00000420363 PPP4CP60510 307 aa26.01■■□□□ 1.75
CPNE1-211ENST00000420363 MAP3K12Q12852 859 aa26.01■■□□□ 1.75
CPNE1-211ENST00000420363 CERS3Q8IU89 383 aa26.01■■□□□ 1.75
CPNE1-211ENST00000420363 OTUD7BQ6GQQ9 843 aa26■■□□□ 1.75
CPNE1-211ENST00000420363 DDX4Q9NQI0 724 aaKnown RBP26■■□□□ 1.75
CPNE1-211ENST00000420363 NDUFB9Q9Y6M9 179 aa26■■□□□ 1.75
CPNE1-211ENST00000420363 SMARCA5O60264 1052 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-211ENST00000420363 HDAC1Q13547 482 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-211ENST00000420363 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-211ENST00000420363 ZNF341Q9BYN7 854 aa25.99■■□□□ 1.75
CPNE1-211ENST00000420363 ANTXR1Q9H6X2 564 aa25.99■■□□□ 1.75
CPNE1-211ENST00000420363 SLC34A2O95436 690 aa25.98■■□□□ 1.75
CPNE1-211ENST00000420363 MAP3K9P80192 1104 aa25.98■■□□□ 1.75
CPNE1-211ENST00000420363 ADGRA1Q86SQ6 560 aa25.98■■□□□ 1.75
CPNE1-211ENST00000420363 AATFQ9NY61 560 aaKnown RBP eCLIP25.98■■□□□ 1.75
CPNE1-211ENST00000420363 CSADQ9Y600 493 aa25.98■■□□□ 1.75
CPNE1-211ENST00000420363 TNRC18O15417 2968 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-211ENST00000420363 MYH7P12883 1935 aa25.97■■□□□ 1.75
CPNE1-211ENST00000420363 IGF2BP3O00425 579 aaKnown RBP eCLIP25.97■■□□□ 1.75
CPNE1-211ENST00000420363 VGLL4Q14135 290 aa25.97■■□□□ 1.75
CPNE1-211ENST00000420363 ZFPM1Q8IX07 1006 aa25.97■■□□□ 1.75
CPNE1-211ENST00000420363 TEX11Q8IYF3 940 aa25.97■■□□□ 1.75
CPNE1-211ENST00000420363 WRNIP1Q96S55 665 aa25.97■■□□□ 1.75
CPNE1-211ENST00000420363 DNAJC2Q99543 621 aaKnown RBP25.97■■□□□ 1.75
CPNE1-211ENST00000420363 HAUS7Q99871 368 aa25.97■■□□□ 1.75
CPNE1-211ENST00000420363 CYP7A1P22680 504 aa25.96■■□□□ 1.75
CPNE1-211ENST00000420363 PICALMQ13492 652 aa25.96■■□□□ 1.75
CPNE1-211ENST00000420363 MAGEB6Q8N7X4 407 aa25.96■■□□□ 1.75
CPNE1-211ENST00000420363 GPATCH3Q96I76 525 aa25.96■■□□□ 1.75
CPNE1-211ENST00000420363 ECHDC1Q9NTX5 307 aa25.96■■□□□ 1.75
CPNE1-211ENST00000420363 ZNF112Q9UJU3 913 aa25.96■■□□□ 1.75
CPNE1-211ENST00000420363 GOLIM4O00461 696 aa25.95■■□□□ 1.74
CPNE1-211ENST00000420363 MAP3K10Q02779 954 aa25.95■■□□□ 1.74
CPNE1-211ENST00000420363 SH3BP5LQ7L8J4 393 aa25.95■■□□□ 1.74
CPNE1-211ENST00000420363 SH3RF3Q8TEJ3 882 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-211ENST00000420363 GCC1Q96CN9 775 aa25.95■■□□□ 1.74
CPNE1-211ENST00000420363 OSBPL5Q9H0X9 879 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-211ENST00000420363 ELP3Q9H9T3 547 aa25.95■■□□□ 1.74
CPNE1-211ENST00000420363 PAG1Q9NWQ8 432 aa25.95■■□□□ 1.74
CPNE1-211ENST00000420363 SUPT16HQ9Y5B9 1047 aaKnown RBP25.95■■□□□ 1.74
CPNE1-211ENST00000420363 GJA5P36382 358 aa25.94■■□□□ 1.74
CPNE1-211ENST00000420363 BCL11AQ9H165 835 aa25.94■■□□□ 1.74
CPNE1-211ENST00000420363 TRIM17Q9Y577 477 aa25.94■■□□□ 1.74
CPNE1-211ENST00000420363 PDE4DIPQ5VU43 2346 aa25.94■■□□□ 1.74
CPNE1-211ENST00000420363 DDTLA6NHG4 134 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-211ENST00000420363 SPDYE5A6NIY4 337 aa25.93■■□□□ 1.74
CPNE1-211ENST00000420363 MIGA2Q7L4E1 593 aa25.93■■□□□ 1.74
CPNE1-211ENST00000420363 ZSCAN29Q8IWY8 852 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-211ENST00000420363 OPTNQ96CV9 577 aa25.93■■□□□ 1.74
CPNE1-211ENST00000420363 BOLA2Q9H3K6 86 aa25.93■■□□□ 1.74
CPNE1-211ENST00000420363 SNCAIPQ9Y6H5 919 aa25.93■■□□□ 1.74
CPNE1-211ENST00000420363 DDX60LQ5H9U9 1706 aaKnown RBP25.92■■□□□ 1.74
CPNE1-211ENST00000420363 TESPA1A2RU30 521 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-211ENST00000420363 PDE6AP16499 860 aa25.92■■□□□ 1.74
CPNE1-211ENST00000420363 NOL9Q5SY16 702 aaKnown RBP25.92■■□□□ 1.74
CPNE1-211ENST00000420363 SIPA1L1O43166 1804 aa25.92■■□□□ 1.74
CPNE1-211ENST00000420363 DOCK1Q14185 1865 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 FLT1P17948 1338 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 TTC41PQ6P2S7 1318 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 TBC1D12O60347 775 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 CRHR2Q13324 411 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 SLC9C2Q5TAH2 1124 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 ERO1BQ86YB8 467 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 EXOC6Q8TAG9 804 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 ERO1AQ96HE7 468 aa25.91■■□□□ 1.74
CPNE1-211ENST00000420363 DHX36Q9H2U1 1008 aaKnown RBP25.91■■□□□ 1.74
CPNE1-211ENST00000420363 OTOP1Q7RTM1 612 aa25.9■■□□□ 1.74
CPNE1-211ENST00000420363 PTPN18Q99952 460 aa25.9■■□□□ 1.74
CPNE1-211ENST00000420363 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.9■■□□□ 1.746e-7■■■■■ 30.8
CPNE1-211ENST00000420363 INPP5BP32019 993 aa25.89■■□□□ 1.74
CPNE1-211ENST00000420363 MIGA1Q8NAN2 632 aa25.89■■□□□ 1.74
CPNE1-211ENST00000420363 ZKSCAN4Q969J2 545 aaPredicted RBP25.89■■□□□ 1.74
CPNE1-211ENST00000420363 EDC3Q96F86 508 aaKnown RBP25.89■■□□□ 1.74
CPNE1-211ENST00000420363 RIOK1Q9BRS2 568 aaKnown RBP25.89■■□□□ 1.74
CPNE1-211ENST00000420363 NAV1Q8NEY1 1877 aa25.89■■□□□ 1.73
CPNE1-211ENST00000420363 TCRBV5S4A2TA0A5A2 114 aa25.88■■□□□ 1.73
CPNE1-211ENST00000420363 PHF20L1A8MW92 1017 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms