RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 FAM83CQ9BQN1 747 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 BACH2Q9BYV9 841 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 SEMA6CQ9H3T2 930 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 NFICP08651 508 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 RXRBP28702 533 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 USP11P51784 963 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 RPS26P62854 115 aaKnown RBP7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 RING1Q06587 406 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 TTLL4Q14679 1199 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 ERMP1Q7Z2K6 904 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 CLEC10AQ8IUN9 316 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 PCDHA4Q9UN74 947 aa7.76□□□□□ -1.17
HMGB1P49-201ENST00000418882 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 HCLS1P14317 486 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 SEZ6L2Q6UXD5 910 aa7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 C12orf40Q86WS4 652 aa7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 RHOVQ96L33 236 aa7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
HMGB1P49-201ENST00000418882 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 FAM95CA0A1B0GW59 222 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 ADMP35318 185 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 ERVK-24P63145 666 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 TSNAXIP1Q2TAA8 658 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 GATA6Q92908 595 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 PLPPR2Q96GM1 343 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 KBTBD4Q9NVX7 518 aa7.74□□□□□ -1.17
HMGB1P49-201ENST00000418882 GARTP22102 1010 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 NFIAQ12857 509 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 RNF43Q68DV7 783 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 BNC2Q6ZN30 1099 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 ISL2Q96A47 359 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 MRRFQ96E11 262 aaKnown RBP7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 MFSD14AQ96MC6 490 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 RSRP1Q9BUV0 290 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 ATXN3LQ9H3M9 355 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 C1GALT1Q9NS00 363 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
HMGB1P49-201ENST00000418882 IGLV1-40P01703 118 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 PF4P02776 101 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 FANCCQ00597 558 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 FAM160A1Q05DH4 1040 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 SCARA3Q6AZY7 606 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 PRKAG2Q9UGJ0 569 aa7.72□□□□□ -1.17
HMGB1P49-201ENST00000418882 MINDY4BA8MYZ0 360 aa7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 VAMP1P23763 118 aa7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 GBP2P32456 591 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 CAMK2GQ13555 558 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZBTB37Q5TC79 503 aa7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 CYFIP1Q7L576 1253 aa7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZDHHC13Q8IUH4 622 aa7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 SMYD4Q8IYR2 804 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 RNF214Q8ND24 703 aa7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P49-201ENST00000418882 FAM221AA4D161 298 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 RBAK-RBAKDNI3L0D1 243 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 GFRA2O00451 464 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 RNGTTO60942 597 aaKnown RBP7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 F13A1P00488 732 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 F13BP05160 661 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 LMNB2Q03252 620 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 CDK5R2Q13319 367 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 PAOXQ6QHF9 649 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 SHKBP1Q8TBC3 707 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 DBNDD2Q9BQY9 259 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 MIR1-1HGQ9H1L0 117 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 PIDD1Q9HB75 910 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 GGT7Q9UJ14 662 aa7.7□□□□□ -1.18
HMGB1P49-201ENST00000418882 PRAMEF27A3QJZ7 478 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 PRR19A6NJB7 356 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 RLBP1P12271 317 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 ITGAEP38570 1179 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 FBXL6Q8N531 539 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 FBXO27Q8NI29 283 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 ELMO3Q96BJ8 720 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 FBRSQ9HAH7 460 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 ADAMTS1Q9UHI8 967 aa7.69□□□□□ -1.18
HMGB1P49-201ENST00000418882 FAM170BA6NMN3 283 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 TGFB1P01137 390 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 MAP7Q14244 749 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 FBXL19Q6PCT2 694 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 HS2ST1Q7LGA3 356 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZAR1Q86SH2 424 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 RELL1Q8IUW5 271 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 YIPF2Q9BWQ6 316 aa7.68□□□□□ -1.18
HMGB1P49-201ENST00000418882 WDR64B1ANS9 1081 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 CILPO75339 1184 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 LMNB1P20700 586 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZNF76P36508 570 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 NKG7Q16617 165 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 HDXQ7Z353 690 aa7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 METTL16Q86W50 562 aaKnown RBP7.67□□□□□ -1.18
HMGB1P49-201ENST00000418882 GOLM1Q8NBJ4 401 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms