RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-202ENST00000418309 ECM2O94769 699 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-202ENST00000418309 LDHCP07864 332 aa17.41■□□□□ 0.38
LINC01006-202ENST00000418309 GSTO1P78417 241 aa17.41■□□□□ 0.38
LINC01006-202ENST00000418309 PI16Q6UXB8 463 aa17.41■□□□□ 0.38
LINC01006-202ENST00000418309 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
LINC01006-202ENST00000418309 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
LINC01006-202ENST00000418309 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
LINC01006-202ENST00000418309 POTEFA5A3E0 1075 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 PDHXO00330 501 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 ANKRD23Q86SG2 305 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 DDX4Q9NQI0 724 aaKnown RBP17.4■□□□□ 0.38
LINC01006-202ENST00000418309 KCNH4Q9UQ05 1017 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
LINC01006-202ENST00000418309 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
LINC01006-202ENST00000418309 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
LINC01006-202ENST00000418309 LACTBP83111 547 aaPredicted RBP17.39■□□□□ 0.37
LINC01006-202ENST00000418309 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 SH3BP5LQ7L8J4 393 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 ITPRIPQ8IWB1 547 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 ARMC5Q96C12 935 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 ARHGAP39Q9C0H5 1083 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 CPA4Q9UI42 421 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 ZHX2Q9Y6X8 837 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 DOCK2Q92608 1830 aa17.39■□□□□ 0.37
LINC01006-202ENST00000418309 CXCL11O14625 94 aa17.38■□□□□ 0.37
LINC01006-202ENST00000418309 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
LINC01006-202ENST00000418309 MCAMP43121 646 aa17.38■□□□□ 0.37
LINC01006-202ENST00000418309 POLA2Q14181 598 aa17.38■□□□□ 0.37
LINC01006-202ENST00000418309 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
LINC01006-202ENST00000418309 TTC39AQ5SRH9 613 aa17.38■□□□□ 0.37
LINC01006-202ENST00000418309 NSUN4Q96CB9 384 aaKnown RBP17.38■□□□□ 0.37
LINC01006-202ENST00000418309 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
LINC01006-202ENST00000418309 SLURP2P0DP57 97 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 PTPRAP18433 802 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 DSG3P32926 999 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 RHBDL3P58872 404 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 C17orf99Q6UX52 265 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 ZNF384Q8TF68 577 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 NOL10Q9BSC4 688 aaKnown RBP17.37■□□□□ 0.37
LINC01006-202ENST00000418309 SNRKQ9NRH2 765 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 ATRNL1Q5VV63 1379 aa17.37■□□□□ 0.37
LINC01006-202ENST00000418309 CTNND1O60716 968 aaKnown RBP17.36■□□□□ 0.37
LINC01006-202ENST00000418309 MYCP01106 439 aaPredicted RBP17.36■□□□□ 0.37
LINC01006-202ENST00000418309 GNRH1P01148 92 aa17.36■□□□□ 0.37
LINC01006-202ENST00000418309 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
LINC01006-202ENST00000418309 PRPF38BQ5VTL8 546 aaKnown RBP17.36■□□□□ 0.37
LINC01006-202ENST00000418309 GADL1Q6ZQY3 521 aa17.36■□□□□ 0.37
LINC01006-202ENST00000418309 FASTKD5Q7L8L6 764 aaKnown RBP17.36■□□□□ 0.37
LINC01006-202ENST00000418309 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
LINC01006-202ENST00000418309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
LINC01006-202ENST00000418309 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
LINC01006-202ENST00000418309 RFX7Q2KHR2 1363 aa17.36■□□□□ 0.37
LINC01006-202ENST00000418309 FMNL1O95466 1100 aaPredicted RBP17.35■□□□□ 0.37
LINC01006-202ENST00000418309 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
LINC01006-202ENST00000418309 EN2P19622 333 aaPredicted RBP17.35■□□□□ 0.37
LINC01006-202ENST00000418309 PSMC4P43686 418 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 MOGSQ13724 837 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 TEX11Q8IYF3 940 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 PARK7Q99497 189 aaKnown RBP17.35■□□□□ 0.37
LINC01006-202ENST00000418309 DBNDD2Q9BQY9 259 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 AFG3L2Q9Y4W6 797 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 ZSWIM8A7E2V4 1837 aa17.35■□□□□ 0.37
LINC01006-202ENST00000418309 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
LINC01006-202ENST00000418309 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
LINC01006-202ENST00000418309 RLBP1P12271 317 aa17.34■□□□□ 0.37
LINC01006-202ENST00000418309 HOXD10P28358 340 aa17.34■□□□□ 0.37
LINC01006-202ENST00000418309 NAA16Q6N069 864 aaPredicted RBP17.34■□□□□ 0.37
LINC01006-202ENST00000418309 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
LINC01006-202ENST00000418309 SH3TC2Q8TF17 1288 aa17.34■□□□□ 0.37
LINC01006-202ENST00000418309 A0A0G2JLL6 359 aaPredicted RBP17.33■□□□□ 0.36
LINC01006-202ENST00000418309 TRIM75PA6NK02 468 aa17.33■□□□□ 0.36
LINC01006-202ENST00000418309 FAM196BA6NMK8 535 aa17.33■□□□□ 0.36
LINC01006-202ENST00000418309 TBC1D12O60347 775 aa17.33■□□□□ 0.36
LINC01006-202ENST00000418309 BAG3O95817 575 aa17.33■□□□□ 0.36
LINC01006-202ENST00000418309 CYP2C8P10632 490 aa17.33■□□□□ 0.36
LINC01006-202ENST00000418309 PRMT2P55345 433 aa17.33■□□□□ 0.36
LINC01006-202ENST00000418309 PRRT2Q7Z6L0 340 aaPredicted RBP17.33■□□□□ 0.36
LINC01006-202ENST00000418309 OSBPL5Q9H0X9 879 aaPredicted RBP17.33■□□□□ 0.36
LINC01006-202ENST00000418309 CCDC84Q86UT8 332 aaPredicted RBP17.32■□□□□ 0.36
LINC01006-202ENST00000418309 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
LINC01006-202ENST00000418309 TRIM47Q96LD4 638 aa17.32■□□□□ 0.36
LINC01006-202ENST00000418309 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC01006-202ENST00000418309 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
LINC01006-202ENST00000418309 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
LINC01006-202ENST00000418309 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
LINC01006-202ENST00000418309 DOCK1Q14185 1865 aa17.31■□□□□ 0.36
LINC01006-202ENST00000418309 ADGRA2Q96PE1 1338 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms