RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ATRNL1Q5VV63 1379 aa17.3■□□□□ 0.36
SSB-204ENST00000417292 TNPO2O14787 897 aaKnown RBP17.3■□□□□ 0.36
SSB-204ENST00000417292 GPR153Q6NV75 609 aa17.3■□□□□ 0.36
SSB-204ENST00000417292 FASTKD5Q7L8L6 764 aaKnown RBP17.3■□□□□ 0.36
SSB-204ENST00000417292 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
SSB-204ENST00000417292 KLHDC4Q8TBB5 520 aa17.3■□□□□ 0.36
SSB-204ENST00000417292 DNAH12Q6ZR08 3092 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 UTYO14607 1347 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 KIF16BQ96L93 1317 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 CAPN2P17655 700 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 FGFR2P21802 821 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 NECAB2Q7Z6G3 386 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 C7orf61Q8IZ16 206 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 ZMYND8Q9ULU4 1186 aaPredicted RBP17.29■□□□□ 0.36
SSB-204ENST00000417292 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
SSB-204ENST00000417292 PTPRAP18433 802 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SSB-204ENST00000417292 SCYL3Q8IZE3 742 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 STXBP5LQ9Y2K9 1186 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 SLC45A1Q9Y2W3 748 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 DOCK3Q8IZD9 2030 aa17.28■□□□□ 0.36
SSB-204ENST00000417292 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
SSB-204ENST00000417292 PRDX5P30044 214 aa17.27■□□□□ 0.36
SSB-204ENST00000417292 PUM3Q15397 648 aaKnown RBP17.27■□□□□ 0.36
SSB-204ENST00000417292 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.27■□□□□ 0.36
SSB-204ENST00000417292 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
SSB-204ENST00000417292 USP40Q9NVE5 1235 aa17.27■□□□□ 0.36
SSB-204ENST00000417292 PTPRFP10586 1907 aa17.27■□□□□ 0.35
SSB-204ENST00000417292 SPTBN5Q9NRC6 3674 aaKnown RBP17.26■□□□□ 0.35
SSB-204ENST00000417292 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
SSB-204ENST00000417292 LRIT3Q3SXY7 679 aa17.26■□□□□ 0.35
SSB-204ENST00000417292 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
SSB-204ENST00000417292 ANKRD13CQ8N6S4 541 aa17.26■□□□□ 0.35
SSB-204ENST00000417292 SMCR8Q8TEV9 937 aaPredicted RBP17.26■□□□□ 0.35
SSB-204ENST00000417292 PICK1Q9NRD5 415 aa17.26■□□□□ 0.35
SSB-204ENST00000417292 MTMR10Q9NXD2 777 aa17.26■□□□□ 0.35
SSB-204ENST00000417292 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.26■□□□□ 0.35
SSB-204ENST00000417292 SALL2Q9Y467 1007 aaPredicted RBP17.26■□□□□ 0.35
SSB-204ENST00000417292 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
SSB-204ENST00000417292 SYN1P17600 705 aa17.25■□□□□ 0.35
SSB-204ENST00000417292 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
SSB-204ENST00000417292 SH3BP5LQ7L8J4 393 aa17.25■□□□□ 0.35
SSB-204ENST00000417292 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
SSB-204ENST00000417292 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
SSB-204ENST00000417292 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
SSB-204ENST00000417292 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
SSB-204ENST00000417292 RGS3P49796 1198 aa17.24■□□□□ 0.35
SSB-204ENST00000417292 MAP3K10Q02779 954 aa17.24■□□□□ 0.35
SSB-204ENST00000417292 CCDC84Q86UT8 332 aaPredicted RBP17.24■□□□□ 0.35
SSB-204ENST00000417292 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
SSB-204ENST00000417292 COA7Q96BR5 231 aa17.24■□□□□ 0.35
SSB-204ENST00000417292 TRIM32Q13049 653 aa17.23■□□□□ 0.35
SSB-204ENST00000417292 TREML2Q5T2D2 321 aa17.23■□□□□ 0.35
SSB-204ENST00000417292 TDHQ8IZJ6 230 aa17.23■□□□□ 0.35
SSB-204ENST00000417292 COL25A1Q9BXS0 654 aaPredicted RBP17.23■□□□□ 0.35
SSB-204ENST00000417292 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
SSB-204ENST00000417292 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
SSB-204ENST00000417292 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
SSB-204ENST00000417292 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
SSB-204ENST00000417292 SLC5A1P13866 664 aa17.22■□□□□ 0.35
SSB-204ENST00000417292 FAM110CQ1W6H9 321 aa17.22■□□□□ 0.35
SSB-204ENST00000417292 LPIN2Q92539 896 aa17.22■□□□□ 0.35
SSB-204ENST00000417292 IDI2Q9BXS1 227 aa17.22■□□□□ 0.35
SSB-204ENST00000417292 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
SSB-204ENST00000417292 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
SSB-204ENST00000417292 DDX60LQ5H9U9 1706 aaKnown RBP17.21■□□□□ 0.35
SSB-204ENST00000417292 CTNND1O60716 968 aaKnown RBP17.21■□□□□ 0.35
SSB-204ENST00000417292 ENTPD3O75355 529 aa17.21■□□□□ 0.35
SSB-204ENST00000417292 HMGCRP04035 888 aa17.21■□□□□ 0.35
SSB-204ENST00000417292 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
SSB-204ENST00000417292 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
SSB-204ENST00000417292 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
SSB-204ENST00000417292 RPTORQ8N122 1335 aa17.21■□□□□ 0.34
SSB-204ENST00000417292 EYA2O00167 538 aa17.2■□□□□ 0.34
SSB-204ENST00000417292 ZSCAN29Q8IWY8 852 aaPredicted RBP17.2■□□□□ 0.34
SSB-204ENST00000417292 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
SSB-204ENST00000417292 C11orf49Q9H6J7 331 aa17.2■□□□□ 0.34
SSB-204ENST00000417292 HMX1Q9NP08 348 aaPredicted RBP17.2■□□□□ 0.34
SSB-204ENST00000417292 DDX4Q9NQI0 724 aaKnown RBP17.2■□□□□ 0.34
SSB-204ENST00000417292 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
SSB-204ENST00000417292 ATG9AQ7Z3C6 839 aa17.19■□□□□ 0.34
SSB-204ENST00000417292 UBE2OQ9C0C9 1292 aaKnown RBP17.19■□□□□ 0.34
SSB-204ENST00000417292 OGDHLQ9ULD0 1010 aa17.19■□□□□ 0.34
SSB-204ENST00000417292 GAKO14976 1311 aa17.19■□□□□ 0.34
SSB-204ENST00000417292 PFASO15067 1338 aa17.19■□□□□ 0.34
SSB-204ENST00000417292 USP44Q9H0E7 712 aa17.18■□□□□ 0.34
SSB-204ENST00000417292 PNMA3Q9UL41 463 aa17.18■□□□□ 0.34
SSB-204ENST00000417292 CDH23Q9H251 3354 aa17.18■□□□□ 0.34
SSB-204ENST00000417292 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
SSB-204ENST00000417292 PLXNB2O15031 1838 aa17.17■□□□□ 0.34
SSB-204ENST00000417292 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.17■□□□□ 0.34
SSB-204ENST00000417292 PROCA1Q8NCQ7 364 aaPredicted RBP17.17■□□□□ 0.34
SSB-204ENST00000417292 TRIB2Q92519 343 aa17.17■□□□□ 0.34
SSB-204ENST00000417292 LOC285556D6RIA3 1793 aa17.16■□□□□ 0.34
SSB-204ENST00000417292 FAM196BA6NMK8 535 aa17.16■□□□□ 0.34
SSB-204ENST00000417292 PHKA1P46020 1223 aa17.16■□□□□ 0.34
SSB-204ENST00000417292 GCLCP48506 637 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms