RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 PSME4Q14997 1843 aa12.04□□□□□ -0.48
DEPDC4-203ENST00000416321 CPA1P15085 419 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 TNIP1Q15025 636 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 CIAPIN1Q6FI81 312 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 RSBN1LQ6PCB5 846 aaPredicted RBP12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 MFSD6Q6ZSS7 791 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 ARHGAP27Q6ZUM4 889 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 TGFBRAP1Q8WUH2 860 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 KRT23Q9C075 422 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 DCP1AQ9NPI6 582 aaPredicted RBP12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 MCM9Q9NXL9 1143 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 TAF6LQ9Y6J9 622 aa12.03□□□□□ -0.48
DEPDC4-203ENST00000416321 NAV1Q8NEY1 1877 aa12.02□□□□□ -0.48
DEPDC4-203ENST00000416321 PSMD14O00487 310 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 CD2BP2O95400 341 aaKnown RBP12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 POLR3DP05423 398 aaPredicted RBP12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 MCM5P33992 734 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 AK2P54819 239 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 EIF6P56537 245 aaKnown RBP12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 RASSF7Q02833 373 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 STOX1Q6ZVD7 989 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 TBC1D10CQ8IV04 446 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 ZSCAN31Q96LW9 406 aaPredicted RBP12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 SYT17Q9BSW7 474 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 MRIQ9BWK5 157 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 SERPINA10Q9UK55 444 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
DEPDC4-203ENST00000416321 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 LAMB1P07942 1786 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 USP17L12C9JPN9 530 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 USP17L21D6R901 530 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 PDE4BQ07343 736 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 RRP12Q5JTH9 1297 aaKnown RBP12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 Q6ZUG5 572 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 AGBL3Q8NEM8 1001 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 STAG1Q8WVM7 1258 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 ZDHHC15Q96MV8 337 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 TTC14Q96N46 770 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 BAZ2AQ9UIF9 1905 aaKnown RBP12.01□□□□□ -0.49
DEPDC4-203ENST00000416321 CXCL9Q07325 125 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 SART3Q15020 963 aaKnown RBP12□□□□□ -0.49
DEPDC4-203ENST00000416321 SBK1Q52WX2 424 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 CTR9Q6PD62 1173 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 TMX3Q96JJ7 454 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
DEPDC4-203ENST00000416321 ZNF287Q9HBT7 754 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 ANAPC4Q9UJX5 808 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 COL4A5P29400 1685 aa12□□□□□ -0.49
DEPDC4-203ENST00000416321 ZNF646O15015 1829 aaPredicted RBP12□□□□□ -0.49
DEPDC4-203ENST00000416321 ERICH2A1L162 156 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 B4E1Z4 1266 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 PRC1O43663 620 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 LMNB1P20700 586 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 RPS12P25398 132 aaKnown RBP11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 MMP14P50281 582 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 RHBDL3P58872 404 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 EVX2Q03828 476 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 PICALMQ13492 652 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 DLGAP5Q15398 846 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 CFAP100Q494V2 611 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 CDC42EP5Q6NZY7 148 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 ESR2Q92731 530 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 SLKQ9H2G2 1235 aaPredicted RBP11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 SAP30BPQ9UHR5 308 aaKnown RBP11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 FLT1P17948 1338 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 NEDD4P46934 1319 aa11.99□□□□□ -0.49
DEPDC4-203ENST00000416321 ADAMTSL1Q8N6G6 1762 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 CYP2D7A0A087X1C5 515 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 MYO1BO43795 1136 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 HLA-DOAP06340 250 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 NT5C2P49902 561 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 SLC4A8Q2Y0W8 1093 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 C12orf60Q5U649 245 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 APOBEC3HQ6NTF7 200 aaKnown RBP11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 CHST3Q7LGC8 479 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 TTC6Q86TZ1 520 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 BRF1Q92994 677 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 CHMP4CQ96CF2 233 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 UBAC1Q9BSL1 405 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 NBPF3Q9H094 633 aa11.98□□□□□ -0.49
DEPDC4-203ENST00000416321 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms