RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 TCP10Q12799 353 aa20.04■□□□□ 0.8
CPNE1-208ENST00000414711 VPS37DQ86XT2 251 aa20.04■□□□□ 0.8
CPNE1-208ENST00000414711 SCYL3Q8IZE3 742 aa20.04■□□□□ 0.8
CPNE1-208ENST00000414711 PICK1Q9NRD5 415 aa20.04■□□□□ 0.8
CPNE1-208ENST00000414711 PTPRFP10586 1907 aa20.04■□□□□ 0.8
CPNE1-208ENST00000414711 CCDC57Q2TAC2 916 aa20.03■□□□□ 0.8
CPNE1-208ENST00000414711 G2E3Q7L622 706 aa20.03■□□□□ 0.8
CPNE1-208ENST00000414711 TSPYL6Q8N831 410 aa20.03■□□□□ 0.8
CPNE1-208ENST00000414711 TRIB2Q92519 343 aa20.03■□□□□ 0.8
CPNE1-208ENST00000414711 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
CPNE1-208ENST00000414711 PRKAR2AP13861 404 aaKnown RBP20.02■□□□□ 0.8
CPNE1-208ENST00000414711 PTPRAP18433 802 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
CPNE1-208ENST00000414711 MAP3K21Q5TCX8 1036 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 HHIPL2Q6UWX4 724 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 LINS1Q8NG48 757 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 AFG3L2Q9Y4W6 797 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 MAST2Q6P0Q8 1798 aa20.02■□□□□ 0.8
CPNE1-208ENST00000414711 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-208ENST00000414711 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
CPNE1-208ENST00000414711 TTYH1Q9H313 450 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-208ENST00000414711 GJD2Q9UKL4 321 aa20.01■□□□□ 0.79
CPNE1-208ENST00000414711 PNMA3Q9UL41 463 aa20.01■□□□□ 0.79
CPNE1-208ENST00000414711 AK9Q5TCS8 1911 aa20.01■□□□□ 0.79
CPNE1-208ENST00000414711 NFIAQ12857 509 aa20■□□□□ 0.79
CPNE1-208ENST00000414711 FBXO33Q7Z6M2 555 aa20■□□□□ 0.79
CPNE1-208ENST00000414711 DNAAF4Q8WXU2 420 aa20■□□□□ 0.79
CPNE1-208ENST00000414711 SUGT1Q9Y2Z0 365 aa20■□□□□ 0.79
CPNE1-208ENST00000414711 ATRNL1Q5VV63 1379 aa19.99■□□□□ 0.79
CPNE1-208ENST00000414711 TRIM75PA6NK02 468 aa19.99■□□□□ 0.79
CPNE1-208ENST00000414711 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
CPNE1-208ENST00000414711 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
CPNE1-208ENST00000414711 LTBP2Q14767 1821 aa19.98■□□□□ 0.79
CPNE1-208ENST00000414711 DOCK2Q92608 1830 aa19.98■□□□□ 0.79
CPNE1-208ENST00000414711 EPHA10Q5JZY3 1008 aa19.98■□□□□ 0.79
CPNE1-208ENST00000414711 TREML2Q5T2D2 321 aa19.98■□□□□ 0.79
CPNE1-208ENST00000414711 FLIIQ13045 1269 aa19.97■□□□□ 0.79
CPNE1-208ENST00000414711 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
CPNE1-208ENST00000414711 CDC42EP5Q6NZY7 148 aa19.97■□□□□ 0.79
CPNE1-208ENST00000414711 FAM198AQ9UFP1 575 aa19.97■□□□□ 0.79
CPNE1-208ENST00000414711 PLXNB2O15031 1838 aa19.97■□□□□ 0.79
CPNE1-208ENST00000414711 DOCK1Q14185 1865 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 CYP2B6P20813 491 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 GCLCP48506 637 aaPredicted RBP19.96■□□□□ 0.79
CPNE1-208ENST00000414711 SMAD3P84022 425 aaKnown RBP19.96■□□□□ 0.79
CPNE1-208ENST00000414711 MAP3K12Q12852 859 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
CPNE1-208ENST00000414711 SHHQ15465 462 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 USP38Q8NB14 1042 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 PRKAG2Q9UGJ0 569 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 DAGLAQ9Y4D2 1042 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 PHIPQ8WWQ0 1821 aa19.96■□□□□ 0.79
CPNE1-208ENST00000414711 C9orf50Q5SZB4 431 aa19.95■□□□□ 0.78
CPNE1-208ENST00000414711 PUS3Q9BZE2 481 aaKnown RBP19.95■□□□□ 0.78
CPNE1-208ENST00000414711 RALBP1Q15311 655 aa19.94■□□□□ 0.78
CPNE1-208ENST00000414711 LHX8Q68G74 356 aa19.94■□□□□ 0.78
CPNE1-208ENST00000414711 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-208ENST00000414711 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
CPNE1-208ENST00000414711 MROH5Q6ZUA9 1318 aa19.94■□□□□ 0.78
CPNE1-208ENST00000414711 ZKSCAN1P17029 563 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-208ENST00000414711 CCND3P30281 292 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-208ENST00000414711 CACNB2Q08289 660 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-208ENST00000414711 ZFPM1Q8IX07 1006 aa19.93■□□□□ 0.78
CPNE1-208ENST00000414711 PROCA1Q8NCQ7 364 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-208ENST00000414711 SOCS4Q8WXH5 440 aa19.93■□□□□ 0.78
CPNE1-208ENST00000414711 LRRFIP2Q9Y608 721 aaKnown RBP19.93■□□□□ 0.78
CPNE1-208ENST00000414711 LOC285556D6RIA3 1793 aa19.93■□□□□ 0.78
CPNE1-208ENST00000414711 DNAH12Q6ZR08 3092 aa19.92■□□□□ 0.78
CPNE1-208ENST00000414711 XRCC5P13010 732 aaKnown RBP19.92■□□□□ 0.78
CPNE1-208ENST00000414711 DIXDC1Q155Q3 683 aa19.92■□□□□ 0.78
CPNE1-208ENST00000414711 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-208ENST00000414711 SENP6Q9GZR1 1112 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-208ENST00000414711 FRMPD3Q5JV73 1810 aa19.91■□□□□ 0.78
CPNE1-208ENST00000414711 CTNND1O60716 968 aaKnown RBP19.91■□□□□ 0.78
CPNE1-208ENST00000414711 TRMT44Q8IYL2 757 aaKnown RBP19.91■□□□□ 0.78
CPNE1-208ENST00000414711 NUDT12Q9BQG2 462 aa19.91■□□□□ 0.78
CPNE1-208ENST00000414711 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-208ENST00000414711 ATN1P54259 1190 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-208ENST00000414711 TWISTNBQ3B726 338 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-208ENST00000414711 TSR2Q969E8 191 aaKnown RBP19.9■□□□□ 0.78
CPNE1-208ENST00000414711 USP40Q9NVE5 1235 aa19.9■□□□□ 0.78
CPNE1-208ENST00000414711 NCOR1O75376 2440 aa19.9■□□□□ 0.78
CPNE1-208ENST00000414711 PABPC4Q13310 644 aaKnown RBP eCLIP19.89■□□□□ 0.77
CPNE1-208ENST00000414711 ADAMTS19Q8TE59 1207 aa19.89■□□□□ 0.77
CPNE1-208ENST00000414711 ASCC2Q9H1I8 757 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-208ENST00000414711 MORF4L1Q9UBU8 362 aa19.89■□□□□ 0.77
CPNE1-208ENST00000414711 MYBBP1AQ9BQG0 1328 aaKnown RBP19.88■□□□□ 0.77
CPNE1-208ENST00000414711 GRM8O00222 908 aa19.88■□□□□ 0.77
CPNE1-208ENST00000414711 APAF1O14727 1248 aa19.88■□□□□ 0.77
CPNE1-208ENST00000414711 RGS3P49796 1198 aa19.88■□□□□ 0.77
CPNE1-208ENST00000414711 RTP1P59025 263 aa19.88■□□□□ 0.77
CPNE1-208ENST00000414711 METTL24Q5JXM2 366 aa19.88■□□□□ 0.77
CPNE1-208ENST00000414711 ZSCAN29Q8IWY8 852 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-208ENST00000414711 BDP1A6H8Y1 2624 aa19.87■□□□□ 0.77
CPNE1-208ENST00000414711 SLURP2P0DP57 97 aa19.87■□□□□ 0.77
CPNE1-208ENST00000414711 MAP3K10Q02779 954 aa19.87■□□□□ 0.77
CPNE1-208ENST00000414711 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
CPNE1-208ENST00000414711 BEND3Q5T5X7 828 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms