RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FAM151AQ8WW52 585 aa36.78■■■■□ 3.48
CSNK1E-206ENST00000413574 CRNKL1Q9BZJ0 848 aaKnown RBP36.78■■■■□ 3.48
CSNK1E-206ENST00000413574 USP5P45974 858 aa36.77■■■■□ 3.48
CSNK1E-206ENST00000413574 TEPSINQ96N21 525 aa36.77■■■■□ 3.48
CSNK1E-206ENST00000413574 HELLSQ9NRZ9 838 aa36.77■■■■□ 3.48
CSNK1E-206ENST00000413574 FLT1P17948 1338 aa36.77■■■■□ 3.48
CSNK1E-206ENST00000413574 MYH1P12882 1939 aa36.76■■■■□ 3.48
CSNK1E-206ENST00000413574 ENTPD3O75355 529 aa36.76■■■■□ 3.48
CSNK1E-206ENST00000413574 CHMLP26374 656 aa36.76■■■■□ 3.48
CSNK1E-206ENST00000413574 NBPF12Q5TAG4 269 aaPredicted RBP36.76■■■■□ 3.48
CSNK1E-206ENST00000413574 SLC4A4Q9Y6R1 1079 aa36.76■■■■□ 3.48
CSNK1E-206ENST00000413574 BAZ2AQ9UIF9 1905 aaKnown RBP36.76■■■■□ 3.47
CSNK1E-206ENST00000413574 TRPM7Q96QT4 1865 aa36.76■■■■□ 3.47
CSNK1E-206ENST00000413574 PASKQ96RG2 1323 aa36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 HIP1O00291 1037 aa36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 MCMDC2Q4G0Z9 681 aa36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 SH3BP5LQ7L8J4 393 aa36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 OSBPL5Q9H0X9 879 aaPredicted RBP36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 PPP2R3BQ9Y5P8 575 aa36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 NAV1Q8NEY1 1877 aa36.75■■■■□ 3.47
CSNK1E-206ENST00000413574 ZNF589Q86UQ0 364 aaPredicted RBP36.74■■■■□ 3.47
CSNK1E-206ENST00000413574 ZNF408Q9H9D4 720 aa36.74■■■■□ 3.47
CSNK1E-206ENST00000413574 IL25Q9H293 177 aa36.74■■■■□ 3.47
CSNK1E-206ENST00000413574 SAP30BPQ9UHR5 308 aaKnown RBP36.74■■■■□ 3.47
CSNK1E-206ENST00000413574 DDTLA6NHG4 134 aaPredicted RBP36.73■■■■□ 3.47
CSNK1E-206ENST00000413574 NPM3O75607 178 aaKnown RBP36.73■■■■□ 3.47
CSNK1E-206ENST00000413574 SLC4A8Q2Y0W8 1093 aa36.72■■■■□ 3.47
CSNK1E-206ENST00000413574 ZSCAN29Q8IWY8 852 aaPredicted RBP36.72■■■■□ 3.47
CSNK1E-206ENST00000413574 MKRN1Q9UHC7 482 aaKnown RBP36.71■■■■□ 3.47
CSNK1E-206ENST00000413574 SSC5DA1L4H1 1573 aa36.71■■■■□ 3.47
CSNK1E-206ENST00000413574 DCP1AQ9NPI6 582 aaPredicted RBP36.7■■■■□ 3.47
CSNK1E-206ENST00000413574 PALD1Q9ULE6 856 aa36.7■■■■□ 3.47
CSNK1E-206ENST00000413574 FZD1Q9UP38 647 aa36.7■■■■□ 3.47
CSNK1E-206ENST00000413574 DDX60LQ5H9U9 1706 aaKnown RBP36.7■■■■□ 3.47
CSNK1E-206ENST00000413574 VPS53Q5VIR6 699 aa36.7■■■■□ 3.47
CSNK1E-206ENST00000413574 GSG1L2A8MUP6 293 aa36.69■■■■□ 3.46
CSNK1E-206ENST00000413574 CELF2O95319 508 aaKnown RBP36.69■■■■□ 3.46
CSNK1E-206ENST00000413574 CST9Q5W186 159 aa36.69■■■■□ 3.46
CSNK1E-206ENST00000413574 RPAP1Q9BWH6 1393 aaPredicted RBP36.68■■■■□ 3.46
CSNK1E-206ENST00000413574 SLURP2P0DP57 97 aa36.68■■■■□ 3.46
CSNK1E-206ENST00000413574 PRKG1Q13976 671 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 CSRNP1Q96S65 589 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 ATP8A2Q9NTI2 1148 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 CCDC171Q6TFL3 1326 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 SIPA1L1O43166 1804 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 FOXP2O15409 715 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 GNAT2P19087 354 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 EPB41L4AQ9HCS5 686 aaPredicted RBP36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 MCM9Q9NXL9 1143 aa36.67■■■■□ 3.46
CSNK1E-206ENST00000413574 ATRNL1Q5VV63 1379 aa36.66■■■■□ 3.46
CSNK1E-206ENST00000413574 APPP05067 770 aa36.66■■■■□ 3.46
CSNK1E-206ENST00000413574 PATL2C9JE40 543 aaKnown RBP36.65■■■■□ 3.46
CSNK1E-206ENST00000413574 EVX2Q03828 476 aa36.65■■■■□ 3.46
CSNK1E-206ENST00000413574 SUPT20HL1Q3ZLR7 823 aa36.65■■■■□ 3.46
CSNK1E-206ENST00000413574 COL2A1P02458 1487 aaPredicted RBP36.64■■■■□ 3.46
CSNK1E-206ENST00000413574 MIGA2Q7L4E1 593 aa36.64■■■■□ 3.46
CSNK1E-206ENST00000413574 CDC45O75419 566 aa36.63■■■■□ 3.45
CSNK1E-206ENST00000413574 MOB2Q70IA6 237 aa36.63■■■■□ 3.45
CSNK1E-206ENST00000413574 CYP2D6P10635 497 aa36.63■■■■□ 3.45
CSNK1E-206ENST00000413574 NF2P35240 595 aa36.63■■■■□ 3.45
CSNK1E-206ENST00000413574 IFNL3Q8IZI9 196 aa36.63■■■■□ 3.45
CSNK1E-206ENST00000413574 RUFY2Q8WXA3 655 aa36.63■■■■□ 3.45
CSNK1E-206ENST00000413574 C1QTNF8P60827 252 aa36.62■■■■□ 3.45
CSNK1E-206ENST00000413574 CYP2D7A0A087X1C5 515 aa36.61■■■■□ 3.45
CSNK1E-206ENST00000413574 SMIM22K7EJ46 135 aa36.61■■■■□ 3.45
CSNK1E-206ENST00000413574 HSPD1P10809 573 aaKnown RBP36.61■■■■□ 3.45
CSNK1E-206ENST00000413574 PLCD1P51178 756 aa36.61■■■■□ 3.45
CSNK1E-206ENST00000413574 DHX36Q9H2U1 1008 aaKnown RBP36.61■■■■□ 3.45
CSNK1E-206ENST00000413574 USP17L12C9JPN9 530 aa36.6■■■■□ 3.45
CSNK1E-206ENST00000413574 USP17L21D6R901 530 aa36.6■■■■□ 3.45
CSNK1E-206ENST00000413574 SGSM2O43147 1006 aa36.6■■■■□ 3.45
CSNK1E-206ENST00000413574 POLR3DP05423 398 aaPredicted RBP36.6■■■■□ 3.45
CSNK1E-206ENST00000413574 DDRGK1Q96HY6 314 aa36.6■■■■□ 3.45
CSNK1E-206ENST00000413574 RAD50Q92878 1312 aa36.6■■■■□ 3.45
CSNK1E-206ENST00000413574 FAM196BA6NMK8 535 aa36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 MFAP1P55081 439 aaKnown RBP36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 TDO2P48775 406 aa36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 TTLL12Q14166 644 aaPredicted RBP36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 GIMAP6Q6P9H5 292 aa36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 CTR9Q6PD62 1173 aa36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 ESYT1Q9BSJ8 1104 aa36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 GBA2Q9HCG7 927 aaPredicted RBP36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 PI4KBQ9UBF8 816 aa36.59■■■■□ 3.45
CSNK1E-206ENST00000413574 APLP1P51693 650 aa36.57■■■■□ 3.44
CSNK1E-206ENST00000413574 NACAP1Q9BZK3 213 aa36.57■■■■□ 3.44
CSNK1E-206ENST00000413574 PAPPA2Q9BXP8 1791 aa36.57■■■■□ 3.44
CSNK1E-206ENST00000413574 USP2O75604 605 aaPredicted RBP36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 HLA-DOAP06340 250 aa36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 ANGEL1Q9UNK9 670 aaKnown RBP36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 LAMB1P07942 1786 aa36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 TMEM88BA6NKF7 163 aa36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 TTC6Q86TZ1 520 aa36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 C2orf69Q8N8R5 385 aa36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 NAPBQ9H115 298 aa36.56■■■■□ 3.44
CSNK1E-206ENST00000413574 PPP1R12BO60237 982 aaPredicted RBP36.55■■■■□ 3.44
CSNK1E-206ENST00000413574 C12orf60Q5U649 245 aa36.55■■■■□ 3.44
CSNK1E-206ENST00000413574 CASC1Q6TDU7 716 aa36.55■■■■□ 3.44
CSNK1E-206ENST00000413574 HOOK2Q96ED9 719 aa36.55■■■■□ 3.44
CSNK1E-206ENST00000413574 OTOFQ9HC10 1997 aa36.54■■■■□ 3.44
CSNK1E-206ENST00000413574 MINDY4BA8MYZ0 360 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms