RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
AC003087.1-201ENST00000412828 LPAR1Q92633 364 aa11.59□□□□□ -0.55
AC003087.1-201ENST00000412828 NUDT12Q9BQG2 462 aa11.59□□□□□ -0.55
AC003087.1-201ENST00000412828 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
AC003087.1-201ENST00000412828 TTF2Q9UNY4 1162 aaKnown RBP11.59□□□□□ -0.55
AC003087.1-201ENST00000412828 LRRC37A2A6NM11 1700 aa11.59□□□□□ -0.55
AC003087.1-201ENST00000412828 GFRA3O60609 400 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 MSCO60682 206 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 CRKP46108 304 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 FPGSQ05932 587 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 SNX17Q15036 470 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 C15orf52Q6ZUT6 534 aaKnown RBP11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 SOCS4Q8WXH5 440 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
AC003087.1-201ENST00000412828 RAB30Q15771 203 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 C1orf53Q5VUE5 145 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 ZNF804AQ7Z570 1209 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 SLC28A3Q9HAS3 691 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 TSPYL4Q9UJ04 414 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 MSRAQ9UJ68 235 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 AGTPBP1Q9UPW5 1226 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
AC003087.1-201ENST00000412828 USP34Q70CQ2 3546 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 GRXCR1A8MXD5 290 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 RAG1P15918 1043 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 IGHMBP2P38935 993 aaKnown RBP11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 CACNB3P54284 484 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 PTPN5P54829 565 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 CTSWP56202 376 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 FKBP1CQ5VVH2 108 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 DDX20Q9UHI6 824 aaKnown RBP11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 JAG2Q9Y219 1238 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 ZHX2Q9Y6X8 837 aa11.56□□□□□ -0.56
AC003087.1-201ENST00000412828 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 MFSD14BQ5SR56 506 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 CCDC191Q8NCU4 936 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 HLA-CQ95604 372 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 DAGLAQ9Y4D2 1042 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 AFG3L2Q9Y4W6 797 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 WDFY4Q6ZS81 3184 aa11.55□□□□□ -0.56
AC003087.1-201ENST00000412828 KIAA0355O15063 1070 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 POU3F3P20264 500 aaPredicted RBP11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 GJD3Q8N144 294 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 MFSD14AQ96MC6 490 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 GREM2Q9H772 168 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 CHPF2Q9P2E5 772 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
AC003087.1-201ENST00000412828 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 KBTBD13C9JR72 458 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 CLTBP09497 229 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 PTPRAP18433 802 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 RASIP1Q5U651 963 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 NKX2-4Q9H2Z4 354 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 PICK1Q9NRD5 415 aa11.53□□□□□ -0.56
AC003087.1-201ENST00000412828 FRMPD3Q5JV73 1810 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 RGS2P41220 211 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 HDLBPQ00341 1268 aaKnown RBP11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 TLE2Q04725 743 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 CHRNDQ07001 517 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 CCL14Q16627 93 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 TDRD7Q8NHU6 1098 aaKnown RBP11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 USP6NLQ92738 828 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 JARID2Q92833 1246 aaPredicted RBP11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 PRRX2Q99811 253 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.57
AC003087.1-201ENST00000412828 REV3LO60673 3130 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 RLFQ13129 1914 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 DCXO43602 365 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 CNGA1P29973 690 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 PRSS33Q8NF86 280 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 FAM151AQ8WW52 585 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 APBA2Q99767 749 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 MTCH2Q9Y6C9 303 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 PLXNA1Q9UIW2 1896 aa11.51□□□□□ -0.57
AC003087.1-201ENST00000412828 AK9Q5TCS8 1911 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 POTEB3A0JP26 581 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 NEFMP07197 916 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 ID4P47928 161 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 MFSD14CQ5VZR4 134 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 POTEBQ6S5H4 581 aa11.5□□□□□ -0.57
AC003087.1-201ENST00000412828 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms