RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ACRBPQ8NEB7 543 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 CATSPER2Q96P56 530 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 OSBPL10Q9BXB5 764 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 IFIH1Q9BYX4 1025 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SARS2Q9NP81 518 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 DONSONQ9NYP3 566 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 C6orf203Q9P0P8 240 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 TPCN1Q9ULQ1 816 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 ARIH1Q9Y4X5 557 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 KIF15Q9NS87 1388 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 NACADO15069 1562 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SYCE3A1L190 88 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 NUTM2FA1L443 756 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SSRP1Q08945 709 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 NUTM2GQ5VZR2 741 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 HORMAD1Q86X24 394 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 KRT78Q8N1N4 520 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 TSC22D3Q99576 134 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 IMPG2Q9BZV3 1241 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 LPXNO60711 386 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 PAK3O75914 559 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 HLA-DPA1P20036 260 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 CTNNA1P35221 906 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SERPINB10P48595 397 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SHQ1Q6PI26 577 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 ADCK1Q86TW2 530 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 TSC1Q92574 1164 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 ABTB1Q969K4 478 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 MRFAP1L1Q96HT8 127 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SAP30BPQ9UHR5 308 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 B4DLN1 442 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 DAB1O75553 588 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 URI1O94763 535 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 PIP4K2BP78356 416 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 RPL19P84098 196 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 C16orf87Q6PH81 154 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 ZC3H18Q86VM9 953 aaKnown RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 TEKT4Q8WW24 435 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 TRIM15Q9C019 465 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SUCLA2Q9P2R7 463 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-202ENST00000411767 TBKBP1A7MCY6 615 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 ICA1Q05084 483 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 STK3Q13188 491 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 HDAC1Q13547 482 aaPredicted RBP5.09□□□□□ -1.6
PTPN13-202ENST00000411767 SRRTQ9BXP5 876 aaKnown RBP5.09□□□□□ -1.6
PTPN13-202ENST00000411767 TMOD2Q9NZR1 351 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 KRT1P04264 644 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 PMS1P54277 932 aaKnown RBP5.09□□□□□ -1.6
PTPN13-202ENST00000411767 CFAP221Q4G0U5 840 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 RASIP1Q5U651 963 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 GCC1Q96CN9 775 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 FAM81BQ96LP2 452 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 RIOK1Q9BRS2 568 aaKnown RBP5.09□□□□□ -1.6
PTPN13-202ENST00000411767 ANO10Q9NW15 660 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 CAPN7Q9Y6W3 813 aa5.09□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC166P0CW27 439 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 TINF2Q9BSI4 451 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 YY1AP1Q9H869 796 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FAM204AQ9H8W3 233 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 HELLSQ9NRZ9 838 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 MIS18AQ9NYP9 233 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF212Q9UDV6 495 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 WBP11Q9Y2W2 641 aaKnown RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 SLC4A7Q9Y6M7 1214 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 E7EVH7 732 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 DIAPH2O60879 1101 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 PDE9AO76083 593 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC15Q0P6D6 951 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 EIF2S3LQ2VIR3 472 aaKnown RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FAM71BQ8TC56 605 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 RAB17Q9H0T7 212 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 ARHGEF3Q9NR81 526 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 PUF60Q9UHX1 559 aaKnown RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 RAD50Q92878 1312 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FAM83GA6ND36 823 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 RASSF10A6NK89 507 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 POLD1P28340 1107 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FOSBP53539 338 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 SSTP61278 116 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FAPQ12884 760 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 BFSP2Q13515 415 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 MTERF2Q49AM1 385 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 PPP4R3CPQ6ZMV5 832 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FAM178BQ8IXR5 827 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FOXP3Q9BZS1 431 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 KCNK9Q9NPC2 374 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 CTNNA3Q9UI47 895 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 FBXL5Q9UKA1 691 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 DYNC1LI2O43237 492 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-202ENST00000411767 SLC12A2P55011 1212 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 TNFAIP2Q03169 654 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 SLC12A1Q13621 1099 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 ZBED2Q9BTP6 218 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 GNGT2O14610 69 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 PGM3O95394 542 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 KRT17Q04695 432 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 LRRC8BQ6P9F7 803 aa5.08□□□□□ -1.6
PTPN13-202ENST00000411767 CNOT7Q9UIV1 285 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms