RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 TTLL4Q14679 1199 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 LRRC14Q15048 493 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 PCNX4Q63HM2 1172 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 SV2BQ7L1I2 683 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 ACSBG1Q96GR2 724 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 AK5Q9Y6K8 562 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 NEFMP07197 916 aa6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 HOXA10P31260 410 aaPredicted RBP6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 MSMPQ1L6U9 139 aa6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 SMYD4Q8IYR2 804 aaPredicted RBP6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 GRIN3AQ8TCU5 1115 aa6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 RNF19AQ9NV58 838 aa6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
RNU4-55P-201ENST00000410731 ERCC3P19447 782 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 CCDC27Q2M243 656 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 DUSP27Q5VZP5 1158 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 MPRIPQ6WCQ1 1025 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 FBXO33Q7Z6M2 555 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 RNF214Q8ND24 703 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 GZF1Q9H116 711 aaPredicted RBP6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 PARP2Q9UGN5 583 aa6.21□□□□□ -1.42
RNU4-55P-201ENST00000410731 CYP26A1O43174 497 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 DAB2P98082 770 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 OGFOD3Q6PK18 319 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 ZNF765Q7L2R6 523 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 ISL2Q96A47 359 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 LGR6Q9HBX8 967 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
RNU4-55P-201ENST00000410731 RNGTTO60942 597 aaKnown RBP6.19□□□□□ -1.42
RNU4-55P-201ENST00000410731 PSMD2Q13200 908 aa6.19□□□□□ -1.42
RNU4-55P-201ENST00000410731 CDK5R2Q13319 367 aa6.19□□□□□ -1.42
RNU4-55P-201ENST00000410731 CCDC85BQ15834 202 aaPredicted RBP6.19□□□□□ -1.42
RNU4-55P-201ENST00000410731 TTBK2Q6IQ55 1244 aa6.19□□□□□ -1.42
RNU4-55P-201ENST00000410731 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
RNU4-55P-201ENST00000410731 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 PRNPP04156 253 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 NTF4P34130 210 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 GP2P55259 537 aaKnown RBP6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 RPS26P62854 115 aaKnown RBP6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 RING1Q06587 406 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 CYP27C1Q4G0S4 372 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 TMC4Q7Z404 712 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
RNU4-55P-201ENST00000410731 DCDC2CA8MYV0 355 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 FANCGO15287 622 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 WNT11O96014 354 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 FAM87AP0C7U9 286 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 ST13P50502 369 aaKnown RBP6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 XPCQ01831 940 aaPredicted RBP6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 PPM1JQ5JR12 505 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 ZBTB37Q5TC79 503 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 MEI1Q5TIA1 1274 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 VSIG10LQ86VR7 867 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 PSMG3-AS1Q96PY0 264 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 LRRC4CQ9HCJ2 640 aa6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 BSDC1Q9NW68 430 aaPredicted RBP6.17□□□□□ -1.42
RNU4-55P-201ENST00000410731 PTPN11Q06124 597 aaPredicted RBP6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 ELMO3Q96BJ8 720 aa6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 SSU72Q9NP77 194 aaKnown RBP6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 PICK1Q9NRD5 415 aa6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 CCDC39Q9UFE4 941 aa6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 ZC3H7BQ9UGR2 993 aaKnown RBP6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 CSADQ9Y600 493 aa6.16□□□□□ -1.42
RNU4-55P-201ENST00000410731 CTSHP09668 335 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 LIG3P49916 1009 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 LRFN4Q6PJG9 635 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 AGMOQ6ZNB7 445 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 C12orf40Q86WS4 652 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 CRELD1Q96HD1 420 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 FAM161BQ96MY7 647 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 NOC4LQ9BVI4 516 aaKnown RBP6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 OAS3Q9Y6K5 1087 aaKnown RBP6.15□□□□□ -1.42
RNU4-55P-201ENST00000410731 SORBS3O60504 671 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 LEFTY1O75610 366 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 RLBP1P12271 317 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 ITGAEP38570 1179 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 INPP5AQ14642 412 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 TAF1CQ15572 869 aaPredicted RBP6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 NFXL1Q6ZNB6 911 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 CYFIP1Q7L576 1253 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 HDXQ7Z353 690 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 UBE3DQ7Z6J8 389 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 TOP6BLQ8N6T0 577 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 KCT2Q8NC54 265 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 PLPPR2Q96GM1 343 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 SNCAIPQ9Y6H5 919 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 USP31Q70CQ4 1352 aa6.14□□□□□ -1.43
RNU4-55P-201ENST00000410731 LMNB1P20700 586 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 SEPT6Q14141 434 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 MAP3K11Q16584 847 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 WIPI1Q5MNZ9 446 aaPredicted RBP6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 ZNF507Q8TCN5 953 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms