RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 LCORLQ8N3X6 602 aa21.82■■□□□ 1.08
PAX3-208ENST00000409828 TGFBRAP1Q8WUH2 860 aa21.82■■□□□ 1.08
PAX3-208ENST00000409828 STRBPQ96SI9 672 aaKnown RBP21.82■■□□□ 1.08
PAX3-208ENST00000409828 ATP8A2Q9NTI2 1148 aa21.82■■□□□ 1.08
PAX3-208ENST00000409828 MKRN1Q9UHC7 482 aaKnown RBP21.82■■□□□ 1.08
PAX3-208ENST00000409828 SCAF8Q9UPN6 1271 aaKnown RBP21.82■■□□□ 1.08
PAX3-208ENST00000409828 FLT1P17948 1338 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 UNCXA6NJT0 531 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 HSPA6P17066 643 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 TCP10Q12799 353 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 SLFNL1Q499Z3 407 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 NBPF12Q5TAG4 269 aaPredicted RBP21.81■■□□□ 1.08
PAX3-208ENST00000409828 CREBZFQ9NS37 354 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 TAOK2Q9UL54 1235 aa21.81■■□□□ 1.08
PAX3-208ENST00000409828 DDX60LQ5H9U9 1706 aaKnown RBP21.8■■□□□ 1.08
PAX3-208ENST00000409828 NAV1Q8NEY1 1877 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 GPAA1O43292 621 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 PPP1R12BO60237 982 aaPredicted RBP21.8■■□□□ 1.08
PAX3-208ENST00000409828 MAP3K10Q02779 954 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 FMR1Q06787 632 aaKnown RBP eCLIP21.8■■□□□ 1.08
PAX3-208ENST00000409828 PICALMQ13492 652 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 MAP3K11Q16584 847 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 GIMAP6Q6P9H5 292 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 ARMT1Q9H993 441 aa21.8■■□□□ 1.08
PAX3-208ENST00000409828 GBA2Q9HCG7 927 aaPredicted RBP21.8■■□□□ 1.08
PAX3-208ENST00000409828 SSC5DA1L4H1 1573 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 USP5P45974 858 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 MCMDC2Q4G0Z9 681 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 PRAMEF18Q5VWM3 479 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 DLK2Q6UY11 383 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 ZFPM1Q8IX07 1006 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 C2orf69Q8N8R5 385 aa21.79■■□□□ 1.08
PAX3-208ENST00000409828 TBC1D12O60347 775 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 DCAF15Q66K64 600 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 SH3BP5LQ7L8J4 393 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 MAPKAPK5Q8IW41 473 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 HHIPL1Q96JK4 782 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 DCP1AQ9NPI6 582 aaPredicted RBP21.78■■□□□ 1.08
PAX3-208ENST00000409828 DIAPH3Q9NSV4 1193 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 PI4KBQ9UBF8 816 aa21.78■■□□□ 1.08
PAX3-208ENST00000409828 BAZ2AQ9UIF9 1905 aaKnown RBP21.77■■□□□ 1.08
PAX3-208ENST00000409828 DDTLA6NHG4 134 aaPredicted RBP21.77■■□□□ 1.08
PAX3-208ENST00000409828 M0R2C6 588 aa21.77■■□□□ 1.08
PAX3-208ENST00000409828 MFAP1P55081 439 aaKnown RBP21.77■■□□□ 1.08
PAX3-208ENST00000409828 ARMC9Q7Z3E5 817 aa21.77■■□□□ 1.08
PAX3-208ENST00000409828 METTL16Q86W50 562 aaKnown RBP21.77■■□□□ 1.08
PAX3-208ENST00000409828 ZSCAN29Q8IWY8 852 aaPredicted RBP21.77■■□□□ 1.08
PAX3-208ENST00000409828 DDRGK1Q96HY6 314 aa21.77■■□□□ 1.08
PAX3-208ENST00000409828 CSRNP1Q96S65 589 aa21.77■■□□□ 1.08
PAX3-208ENST00000409828 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
PAX3-208ENST00000409828 SLC4A4Q9Y6R1 1079 aa21.77■■□□□ 1.08
PAX3-208ENST00000409828 NMIQ13287 307 aaPredicted RBP21.76■■□□□ 1.07
PAX3-208ENST00000409828 TTC6Q86TZ1 520 aa21.76■■□□□ 1.07
PAX3-208ENST00000409828 SAPCD2Q86UD0 394 aa21.76■■□□□ 1.07
PAX3-208ENST00000409828 FOXP4Q8IVH2 680 aaPredicted RBP21.76■■□□□ 1.07
PAX3-208ENST00000409828 CDAN1Q8IWY9 1227 aa21.76■■□□□ 1.07
PAX3-208ENST00000409828 SEC62Q99442 399 aaKnown RBP21.76■■□□□ 1.07
PAX3-208ENST00000409828 ZNF408Q9H9D4 720 aa21.76■■□□□ 1.07
PAX3-208ENST00000409828 SIPA1L1O43166 1804 aa21.76■■□□□ 1.07
PAX3-208ENST00000409828 A0A0D9SFI3 127 aa21.75■■□□□ 1.07
PAX3-208ENST00000409828 PATL2C9JE40 543 aaKnown RBP21.75■■□□□ 1.07
PAX3-208ENST00000409828 SKAP1Q86WV1 359 aa21.75■■□□□ 1.07
PAX3-208ENST00000409828 SDR42E1Q8WUS8 393 aa21.75■■□□□ 1.07
PAX3-208ENST00000409828 FAM227BQ96M60 508 aa21.75■■□□□ 1.07
PAX3-208ENST00000409828 EHD4Q9H223 541 aa21.75■■□□□ 1.07
PAX3-208ENST00000409828 HERC5Q9UII4 1024 aaKnown RBP21.75■■□□□ 1.07
PAX3-208ENST00000409828 RAD50Q92878 1312 aa21.75■■□□□ 1.07
PAX3-208ENST00000409828 GSG1L2A8MUP6 293 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 USP2O75604 605 aaPredicted RBP21.74■■□□□ 1.07
PAX3-208ENST00000409828 HLA-DOAP06340 250 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 CHMLP26374 656 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 IREB2P48200 963 aaKnown RBP21.74■■□□□ 1.07
PAX3-208ENST00000409828 LDLRAD1Q5T700 205 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 RUFY2Q8WXA3 655 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 ZNF341Q9BYN7 854 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 ZNF112Q9UJU3 913 aa21.74■■□□□ 1.07
PAX3-208ENST00000409828 RASSF10A6NK89 507 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 PRKAB2O43741 272 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 SBK1Q52WX2 424 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 CWC27Q6UX04 472 aaKnown RBP21.73■■□□□ 1.07
PAX3-208ENST00000409828 AMOTL1Q8IY63 956 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 KLRG1Q96E93 195 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 NACAP1Q9BZK3 213 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 MCM9Q9NXL9 1143 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 PALD1Q9ULE6 856 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 CCDC171Q6TFL3 1326 aa21.73■■□□□ 1.07
PAX3-208ENST00000409828 ARPP21Q9UBL0 812 aaPredicted RBP21.72■■□□□ 1.07
PAX3-208ENST00000409828 ANGEL1Q9UNK9 670 aaKnown RBP21.72■■□□□ 1.07
PAX3-208ENST00000409828 OTOFQ9HC10 1997 aa21.71■■□□□ 1.07
PAX3-208ENST00000409828 HUNKP57058 714 aa21.71■■□□□ 1.07
PAX3-208ENST00000409828 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
PAX3-208ENST00000409828 ALX1Q15699 326 aa21.71■■□□□ 1.07
PAX3-208ENST00000409828 ANKRD13AQ8IZ07 590 aa21.71■■□□□ 1.07
PAX3-208ENST00000409828 IFNL3Q8IZI9 196 aa21.71■■□□□ 1.07
PAX3-208ENST00000409828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.71■■□□□ 1.07
PAX3-208ENST00000409828 ABT1Q9ULW3 272 aaKnown RBP21.71■■□□□ 1.07
PAX3-208ENST00000409828 ZMYM6O95789 1325 aa21.71■■□□□ 1.07
PAX3-208ENST00000409828 LAMB1P07942 1786 aa21.7■■□□□ 1.06
PAX3-208ENST00000409828 POLR3DP05423 398 aaPredicted RBP21.7■■□□□ 1.06
PAX3-208ENST00000409828 MAP3K9P80192 1104 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms