RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PDE3AQ14432 1141 aa24.04■■□□□ 1.44
TSPAN4-209ENST00000409543 TLR7Q9NYK1 1049 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-209ENST00000409543 IGSF3O75054 1194 aa24.03■■□□□ 1.44
TSPAN4-209ENST00000409543 NPM3O75607 178 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-209ENST00000409543 BRI3BPQ8WY22 251 aa24.03■■□□□ 1.44
TSPAN4-209ENST00000409543 DDX4Q9NQI0 724 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-209ENST00000409543 CCL15-CCL14A0A0B4J2E2 113 aa24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 HMMRO75330 724 aa24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 CYP2E1P05181 493 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 PPIL2Q13356 520 aa24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 CCL15Q16663 113 aa24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 SH3BP5LQ7L8J4 393 aa24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 ZSCAN29Q8IWY8 852 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 ATRNL1Q5VV63 1379 aa24.02■■□□□ 1.44
TSPAN4-209ENST00000409543 IRF6O14896 467 aa24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 MAP3K10Q02779 954 aa24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 PPATQ06203 517 aa24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 CRHR2Q13324 411 aa24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 PICALMQ13492 652 aa24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 PKN2Q16513 984 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 SIRT2Q8IXJ6 389 aa24.01■■□□□ 1.43
TSPAN4-209ENST00000409543 DDTLA6NHG4 134 aaPredicted RBP24■■□□□ 1.43
TSPAN4-209ENST00000409543 CETPP11597 493 aa24■■□□□ 1.43
TSPAN4-209ENST00000409543 ZAP70P43403 619 aa24■■□□□ 1.43
TSPAN4-209ENST00000409543 SNAPC2Q13487 334 aa24■■□□□ 1.43
TSPAN4-209ENST00000409543 NOL9Q5SY16 702 aaKnown RBP24■■□□□ 1.43
TSPAN4-209ENST00000409543 NAA16Q6N069 864 aaPredicted RBP24■■□□□ 1.43
TSPAN4-209ENST00000409543 AACSQ86V21 672 aa24■■□□□ 1.43
TSPAN4-209ENST00000409543 RHPN1Q8TCX5 695 aa24■■□□□ 1.43
TSPAN4-209ENST00000409543 DOCK2Q92608 1830 aa24■■□□□ 1.43
TSPAN4-209ENST00000409543 PHF20L1A8MW92 1017 aa23.99■■□□□ 1.43
TSPAN4-209ENST00000409543 C20orf194Q5TEA3 1177 aa23.99■■□□□ 1.43
TSPAN4-209ENST00000409543 NOL10Q9BSC4 688 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-209ENST00000409543 IL1RAPL2Q9NP60 686 aa23.98■■□□□ 1.43
TSPAN4-209ENST00000409543 PIH1D3Q9NQM4 214 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-209ENST00000409543 BAG3O95817 575 aa23.97■■□□□ 1.43
TSPAN4-209ENST00000409543 PPP4CP60510 307 aa23.97■■□□□ 1.43
TSPAN4-209ENST00000409543 MAST2Q6P0Q8 1798 aa23.97■■□□□ 1.43
TSPAN4-209ENST00000409543 FAM43AQ8N2R8 423 aa23.97■■□□□ 1.43
TSPAN4-209ENST00000409543 KIF1BPQ96EK5 621 aa23.97■■□□□ 1.43
TSPAN4-209ENST00000409543 ZCCHC17Q9NP64 241 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-209ENST00000409543 COL2A1P02458 1487 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 RAB11FIP3O75154 756 aa23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 PLCG2P16885 1265 aa23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 TEX11Q8IYF3 940 aa23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 CLASRPQ8N2M8 674 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 SH3RF3Q8TEJ3 882 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 ZFYVE28Q9HCC9 887 aa23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 KCNH4Q9UQ05 1017 aa23.96■■□□□ 1.43
TSPAN4-209ENST00000409543 TBC1D12O60347 775 aa23.95■■□□□ 1.42
TSPAN4-209ENST00000409543 TAF1CQ15572 869 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-209ENST00000409543 SCYL3Q8IZE3 742 aa23.95■■□□□ 1.42
TSPAN4-209ENST00000409543 OSBPL5Q9H0X9 879 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-209ENST00000409543 AATFQ9NY61 560 aaKnown RBP eCLIP23.95■■□□□ 1.42
TSPAN4-209ENST00000409543 MYO5AQ9Y4I1 1855 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-209ENST00000409543 BTBD19C9JJ37 291 aa23.94■■□□□ 1.42
TSPAN4-209ENST00000409543 ADGRA1Q86SQ6 560 aa23.94■■□□□ 1.42
TSPAN4-209ENST00000409543 ERO1AQ96HE7 468 aa23.94■■□□□ 1.42
TSPAN4-209ENST00000409543 APBB1O00213 710 aa23.93■■□□□ 1.42
TSPAN4-209ENST00000409543 CTNND1O60716 968 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-209ENST00000409543 SP3Q02447 781 aa23.93■■□□□ 1.42
TSPAN4-209ENST00000409543 FBXO46Q6PJ61 603 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-209ENST00000409543 PICK1Q9NRD5 415 aa23.93■■□□□ 1.42
TSPAN4-209ENST00000409543 HPS5Q9UPZ3 1129 aa23.93■■□□□ 1.42
TSPAN4-209ENST00000409543 CXCL11O14625 94 aa23.92■■□□□ 1.42
TSPAN4-209ENST00000409543 SLURP2P0DP57 97 aa23.92■■□□□ 1.42
TSPAN4-209ENST00000409543 RGS19P49795 217 aa23.92■■□□□ 1.42
TSPAN4-209ENST00000409543 TMED8Q6PL24 325 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-209ENST00000409543 IDH1O75874 414 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-209ENST00000409543 IFIT2P09913 472 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-209ENST00000409543 PTPRAP18433 802 aa23.91■■□□□ 1.42
TSPAN4-209ENST00000409543 CYP7A1P22680 504 aa23.91■■□□□ 1.42
TSPAN4-209ENST00000409543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.91■■□□□ 1.421e-7■■■■■ 39.7
TSPAN4-209ENST00000409543 NDUFB9Q9Y6M9 179 aa23.91■■□□□ 1.42
TSPAN4-209ENST00000409543 MAP3K12Q12852 859 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 OTOP1Q7RTM1 612 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 ANKRD23Q86SG2 305 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 CD99L2Q8TCZ2 262 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 DHX36Q9H2U1 1008 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 ANTXR1Q9H6X2 564 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 TRIM17Q9Y577 477 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 ZHX2Q9Y6X8 837 aa23.9■■□□□ 1.42
TSPAN4-209ENST00000409543 TLR2O60603 784 aa23.89■■□□□ 1.41
TSPAN4-209ENST00000409543 MOGSQ13724 837 aa23.89■■□□□ 1.41
TSPAN4-209ENST00000409543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.89■■□□□ 1.41
TSPAN4-209ENST00000409543 TGFBRAP1Q8WUH2 860 aa23.89■■□□□ 1.41
TSPAN4-209ENST00000409543 PI4KBQ9UBF8 816 aa23.89■■□□□ 1.41
TSPAN4-209ENST00000409543 AFG3L2Q9Y4W6 797 aa23.89■■□□□ 1.41
TSPAN4-209ENST00000409543 TTF1Q15361 905 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-209ENST00000409543 CERS3Q8IU89 383 aa23.88■■□□□ 1.41
TSPAN4-209ENST00000409543 MAGEB6Q8N7X4 407 aa23.88■■□□□ 1.41
TSPAN4-209ENST00000409543 HERC5Q9UII4 1024 aaKnown RBP23.88■■□□□ 1.41
TSPAN4-209ENST00000409543 DOCK1Q14185 1865 aa23.87■■□□□ 1.41
TSPAN4-209ENST00000409543 FLT1P17948 1338 aa23.87■■□□□ 1.41
TSPAN4-209ENST00000409543 FAM196BA6NMK8 535 aa23.87■■□□□ 1.41
TSPAN4-209ENST00000409543 PDHXO00330 501 aa23.87■■□□□ 1.41
TSPAN4-209ENST00000409543 DYNLL1P63167 89 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-209ENST00000409543 MAPKAPK5Q8IW41 473 aa23.87■■□□□ 1.41
TSPAN4-209ENST00000409543 CDK5RAP2Q96SN8 1893 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms