RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PAXBP1Q9Y5B6 917 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 KLRK1P26718 216 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 CHRNDQ07001 517 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 ELF2Q15723 593 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 SYT10Q6XYQ8 523 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 LINC00301Q8NCQ3 95 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 KIAA1468Q9P260 1216 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 CGNQ9P2M7 1197 aaKnown RBP15.39■□□□□ 0.05
COL6A2-204ENST00000409416 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 GOLGA8HP0CJ92 632 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 PICALMQ13492 652 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 LONRF3Q496Y0 759 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 IFNL3Q8IZI9 196 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 KIF18AQ8NI77 898 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 RASGRP4Q8TDF6 673 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-204ENST00000409416 PFKFB1P16118 471 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 RTN1Q16799 776 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 CAVIN4Q5BKX8 364 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 ADALQ6DHV7 355 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 OLFM4Q6UX06 510 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 DZIP1Q86YF9 867 aaKnown RBP15.38■□□□□ 0.05
COL6A2-204ENST00000409416 KCNG4Q8TDN1 519 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 MRFAP1L1Q96HT8 127 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 PCMTD1Q96MG8 357 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-204ENST00000409416 CYP2D6P10635 497 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 ANO1Q5XXA6 986 aa15.38■□□□□ 0.05
COL6A2-204ENST00000409416 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
COL6A2-204ENST00000409416 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
COL6A2-204ENST00000409416 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 USP17L21D6R901 530 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 FBXO18Q8NFZ0 1043 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 MCM9Q9NXL9 1143 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 POLR2DO15514 142 aaKnown RBP15.37■□□□□ 0.05
COL6A2-204ENST00000409416 MARCH6O60337 910 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 PUM3Q15397 648 aaKnown RBP15.37■□□□□ 0.05
COL6A2-204ENST00000409416 CCDC87Q9NVE4 849 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 LMO7Q8WWI1 1683 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 ENGASEQ8NFI3 743 aa15.37■□□□□ 0.05
COL6A2-204ENST00000409416 ANTXR2P58335 489 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 GRIN1Q05586 938 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 CELF1Q92879 486 aaKnown RBP15.36■□□□□ 0.05
COL6A2-204ENST00000409416 HINFPQ9BQA5 517 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 BLZF1Q9H2G9 400 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 CYP19A1P11511 503 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-204ENST00000409416 MCM7P33993 719 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 DIXDC1Q155Q3 683 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 ENOX2Q16206 610 aaKnown RBP15.36■□□□□ 0.05
COL6A2-204ENST00000409416 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 OXER1Q8TDS5 423 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 MAGEB6P1A0A0J9YX57 407 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
COL6A2-204ENST00000409416 VWA3AA6NCI4 1184 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 APOA5Q6Q788 366 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 GPKOWQ92917 476 aaPredicted RBP eCLIP15.35■□□□□ 0.05
COL6A2-204ENST00000409416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL6A2-204ENST00000409416 N4BP2Q86UW6 1770 aaPredicted RBP15.35■□□□□ 0.05
COL6A2-204ENST00000409416 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 ZBTB22O15209 634 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 NEMFO60524 1076 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 SSBP05455 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL6A2-204ENST00000409416 PPARDQ03181 441 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 KARSQ15046 597 aaKnown RBP15.35■□□□□ 0.05
COL6A2-204ENST00000409416 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 RGPD5Q99666 1765 aa15.35■□□□□ 0.05
COL6A2-204ENST00000409416 DNA2P51530 1060 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 NLRP5P59047 1200 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 CCZ1BP86790 482 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 CCZ1P86791 482 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 GNL3LQ9NVN8 582 aaKnown RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 DNAI1Q9UI46 699 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 JCADQ9P266 1359 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 ADD2P35612 726 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 UBASH3AP57075 661 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 ITPK1Q13572 414 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 PRDX5P30044 214 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 GSDMDP57764 484 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 ANKRD7Q92527 254 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 LPIN2Q92539 896 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
COL6A2-204ENST00000409416 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
COL6A2-204ENST00000409416 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 CTIFO43310 598 aaKnown RBP15.33■□□□□ 0.05
COL6A2-204ENST00000409416 URI1O94763 535 aaPredicted RBP15.33■□□□□ 0.05
COL6A2-204ENST00000409416 FANCCQ00597 558 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 KIF23Q02241 960 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms