RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SCYL3Q8IZE3 742 aa20.92■□□□□ 0.94
CHMP3-203ENST00000409225 SMCR8Q8TEV9 937 aaPredicted RBP20.92■□□□□ 0.94
CHMP3-203ENST00000409225 DIS3LQ8TF46 1054 aaKnown RBP20.92■□□□□ 0.94
CHMP3-203ENST00000409225 PAK6Q9NQU5 681 aaPredicted RBP20.92■□□□□ 0.94
CHMP3-203ENST00000409225 MYH13Q9UKX3 1938 aa20.92■□□□□ 0.94
CHMP3-203ENST00000409225 PHF20L1A8MW92 1017 aa20.91■□□□□ 0.94
CHMP3-203ENST00000409225 SLC5A1P13866 664 aa20.91■□□□□ 0.94
CHMP3-203ENST00000409225 PTPRAP18433 802 aa20.91■□□□□ 0.94
CHMP3-203ENST00000409225 C7orf61Q8IZ16 206 aa20.91■□□□□ 0.94
CHMP3-203ENST00000409225 AFG3L2Q9Y4W6 797 aa20.91■□□□□ 0.94
CHMP3-203ENST00000409225 ALPK3Q96L96 1907 aa20.9■□□□□ 0.94
CHMP3-203ENST00000409225 ATRNL1Q5VV63 1379 aa20.9■□□□□ 0.94
CHMP3-203ENST00000409225 CAPN2P17655 700 aa20.9■□□□□ 0.94
CHMP3-203ENST00000409225 NECAB2Q7Z6G3 386 aa20.9■□□□□ 0.94
CHMP3-203ENST00000409225 CRISPLD2Q9H0B8 497 aa20.9■□□□□ 0.94
CHMP3-203ENST00000409225 ZMYND8Q9ULU4 1186 aaPredicted RBP20.9■□□□□ 0.94
CHMP3-203ENST00000409225 SLC45A1Q9Y2W3 748 aa20.9■□□□□ 0.94
CHMP3-203ENST00000409225 LDHBP07195 334 aaKnown RBP20.89■□□□□ 0.93
CHMP3-203ENST00000409225 MNX1P50219 401 aaPredicted RBP20.89■□□□□ 0.93
CHMP3-203ENST00000409225 LPIN2Q92539 896 aa20.89■□□□□ 0.93
CHMP3-203ENST00000409225 COA7Q96BR5 231 aa20.89■□□□□ 0.93
CHMP3-203ENST00000409225 GDF15Q99988 308 aa20.89■□□□□ 0.93
CHMP3-203ENST00000409225 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.89■□□□□ 0.93
CHMP3-203ENST00000409225 DOCK2Q92608 1830 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 A0A0C4DFX4 3053 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 TRIM75PA6NK02 468 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 RGS3P49796 1198 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 Q7L0L9 218 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 DEFB123Q8N688 67 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 ANKRD13CQ8N6S4 541 aa20.88■□□□□ 0.93
CHMP3-203ENST00000409225 LRRFIP2Q9Y608 721 aaKnown RBP20.88■□□□□ 0.93
CHMP3-203ENST00000409225 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
CHMP3-203ENST00000409225 BMP8BP34820 402 aa20.87■□□□□ 0.93
CHMP3-203ENST00000409225 ZSCAN29Q8IWY8 852 aaPredicted RBP20.87■□□□□ 0.93
CHMP3-203ENST00000409225 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.87■□□□□ 0.93
CHMP3-203ENST00000409225 CUL9Q8IWT3 2517 aa20.86■□□□□ 0.93
CHMP3-203ENST00000409225 EYA2O00167 538 aa20.86■□□□□ 0.93
CHMP3-203ENST00000409225 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
CHMP3-203ENST00000409225 CCDC84Q86UT8 332 aaPredicted RBP20.86■□□□□ 0.93
CHMP3-203ENST00000409225 SYN1P17600 705 aa20.85■□□□□ 0.93
CHMP3-203ENST00000409225 AGTPBP1Q9UPW5 1226 aa20.85■□□□□ 0.93
CHMP3-203ENST00000409225 PTPRFP10586 1907 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 DOCK3Q8IZD9 2030 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 ENTPD3O75355 529 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 TREML2Q5T2D2 321 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 GPR153Q6NV75 609 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 ANKLE1Q8NAG6 615 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 IDI2Q9BXS1 227 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 GNL3LQ9NVN8 582 aaKnown RBP20.84■□□□□ 0.93
CHMP3-203ENST00000409225 DOCK1Q14185 1865 aa20.84■□□□□ 0.93
CHMP3-203ENST00000409225 DDTLA6NHG4 134 aaPredicted RBP20.83■□□□□ 0.93
CHMP3-203ENST00000409225 CTNND1O60716 968 aaKnown RBP20.83■□□□□ 0.93
CHMP3-203ENST00000409225 HMGCRP04035 888 aa20.83■□□□□ 0.93
CHMP3-203ENST00000409225 RFX5P48382 616 aaPredicted RBP20.83■□□□□ 0.93
CHMP3-203ENST00000409225 PICALMQ13492 652 aa20.83■□□□□ 0.93
CHMP3-203ENST00000409225 FAM110CQ1W6H9 321 aa20.83■□□□□ 0.93
CHMP3-203ENST00000409225 MRS2Q9HD23 443 aa20.83■□□□□ 0.93
CHMP3-203ENST00000409225 PHIPQ8WWQ0 1821 aa20.83■□□□□ 0.92
CHMP3-203ENST00000409225 SALL1Q9NSC2 1324 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 MAGEA10P43363 369 aaPredicted RBP20.82■□□□□ 0.92
CHMP3-203ENST00000409225 TRIM32Q13049 653 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 ATP2B3Q16720 1220 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 ATG9AQ7Z3C6 839 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 NBPF3Q9H094 633 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 USP44Q9H0E7 712 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 PNMA3Q9UL41 463 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 STXBP5LQ9Y2K9 1186 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 RFX7Q2KHR2 1363 aa20.82■□□□□ 0.92
CHMP3-203ENST00000409225 MAP3K10Q02779 954 aa20.81■□□□□ 0.92
CHMP3-203ENST00000409225 LRIT3Q3SXY7 679 aa20.81■□□□□ 0.92
CHMP3-203ENST00000409225 SIL1Q9H173 461 aa20.81■□□□□ 0.92
CHMP3-203ENST00000409225 C11orf49Q9H6J7 331 aa20.81■□□□□ 0.92
CHMP3-203ENST00000409225 DDX4Q9NQI0 724 aaKnown RBP20.81■□□□□ 0.92
CHMP3-203ENST00000409225 DENND2AQ9ULE3 1009 aa20.81■□□□□ 0.92
CHMP3-203ENST00000409225 MYH2Q9UKX2 1941 aa20.8■□□□□ 0.92
CHMP3-203ENST00000409225 PHKA1P46020 1223 aa20.8■□□□□ 0.92
CHMP3-203ENST00000409225 TDHQ8IZJ6 230 aa20.8■□□□□ 0.92
CHMP3-203ENST00000409225 MRPL50Q8N5N7 158 aaKnown RBP20.8■□□□□ 0.92
CHMP3-203ENST00000409225 HMX1Q9NP08 348 aaPredicted RBP20.8■□□□□ 0.92
CHMP3-203ENST00000409225 MTMR10Q9NXD2 777 aa20.8■□□□□ 0.92
CHMP3-203ENST00000409225 GAKO14976 1311 aa20.79■□□□□ 0.92
CHMP3-203ENST00000409225 RPTORQ8N122 1335 aa20.79■□□□□ 0.92
CHMP3-203ENST00000409225 DDX60LQ5H9U9 1706 aaKnown RBP20.79■□□□□ 0.92
CHMP3-203ENST00000409225 DZIP1Q86YF9 867 aaKnown RBP20.79■□□□□ 0.92
CHMP3-203ENST00000409225 CEP126Q9P2H0 1117 aa20.79■□□□□ 0.92
CHMP3-203ENST00000409225 FAM196BA6NMK8 535 aa20.78■□□□□ 0.92
CHMP3-203ENST00000409225 SEMA3EO15041 775 aa20.78■□□□□ 0.92
CHMP3-203ENST00000409225 BTDP43251 543 aa20.78■□□□□ 0.92
CHMP3-203ENST00000409225 PROCA1Q8NCQ7 364 aaPredicted RBP20.78■□□□□ 0.92
CHMP3-203ENST00000409225 UBE2OQ9C0C9 1292 aaKnown RBP20.78■□□□□ 0.92
CHMP3-203ENST00000409225 GJD2Q9UKL4 321 aa20.78■□□□□ 0.92
CHMP3-203ENST00000409225 GCLCP48506 637 aaPredicted RBP20.77■□□□□ 0.92
CHMP3-203ENST00000409225 SPP2Q13103 211 aa20.77■□□□□ 0.92
CHMP3-203ENST00000409225 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
CHMP3-203ENST00000409225 ABCF2Q9UG63 623 aa20.77■□□□□ 0.92
CHMP3-203ENST00000409225 PTPRCP08575 1304 aa20.77■□□□□ 0.91
CHMP3-203ENST00000409225 ADORA1P30542 326 aa20.76■□□□□ 0.91
CHMP3-203ENST00000409225 HMGCS2P54868 508 aa20.76■□□□□ 0.91
CHMP3-203ENST00000409225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.76■□□□□ 0.91
CHMP3-203ENST00000409225 PABPC4Q13310 644 aaKnown RBP eCLIP20.75■□□□□ 0.918e-8■□□□□ 10.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms