RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SLC26A6Q9BXS9 759 aa19.51■□□□□ 0.71
NUP50-203ENST00000407019 PPP6R2O75170 966 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
NUP50-203ENST00000407019 LRMPQ12912 555 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 CLEC4GQ6UXB4 293 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 JMYQ8N9B5 988 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 MIGA1Q8NAN2 632 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 WASF1Q92558 559 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 RNF41Q9H4P4 317 aaPredicted RBP19.5■□□□□ 0.71
NUP50-203ENST00000407019 TOMM22Q9NS69 142 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 MROH7-TTC4A0A0A0MT08 1334 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 COL5A3P25940 1745 aaPredicted RBP19.5■□□□□ 0.71
NUP50-203ENST00000407019 WDHD1O75717 1129 aaPredicted RBP19.5■□□□□ 0.71
NUP50-203ENST00000407019 SLC3A2P08195 630 aaKnown RBP19.5■□□□□ 0.71
NUP50-203ENST00000407019 CYP7A1P22680 504 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
NUP50-203ENST00000407019 MARCKSP29966 332 aaPredicted RBP19.5■□□□□ 0.71
NUP50-203ENST00000407019 ANKRD18AQ8IVF6 992 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 MTA3Q9BTC8 594 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 TAOK2Q9UL54 1235 aa19.5■□□□□ 0.71
NUP50-203ENST00000407019 COL4A1P02462 1669 aa19.49■□□□□ 0.71
NUP50-203ENST00000407019 ZNF804BA4D1E1 1349 aa19.49■□□□□ 0.71
NUP50-203ENST00000407019 IFNAR1P17181 557 aa19.49■□□□□ 0.71
NUP50-203ENST00000407019 RBM10P98175 930 aaKnown RBP19.49■□□□□ 0.71
NUP50-203ENST00000407019 WTAPQ15007 396 aa19.49■□□□□ 0.71
NUP50-203ENST00000407019 FBXW7Q969H0 707 aa19.49■□□□□ 0.71
NUP50-203ENST00000407019 BPIFA3Q9BQP9 254 aa19.49■□□□□ 0.71
NUP50-203ENST00000407019 GNL3LQ9NVN8 582 aaKnown RBP19.49■□□□□ 0.71
NUP50-203ENST00000407019 ERICH2A1L162 156 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 PTPAQ15257 358 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 CCDC144BQ3MJ40 725 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.48■□□□□ 0.71
NUP50-203ENST00000407019 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
NUP50-203ENST00000407019 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
NUP50-203ENST00000407019 KCNQ2O43526 872 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 PPARAQ07869 468 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 RTN1Q16799 776 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 DPCR1Q3MIW9 517 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 ERFEQ4G0M1 354 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 NUTM2AQ8IVF1 878 aaPredicted RBP19.48■□□□□ 0.71
NUP50-203ENST00000407019 TIGD1Q96MW7 591 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 MAP3K14Q99558 947 aa19.48■□□□□ 0.71
NUP50-203ENST00000407019 IQSEC3Q9UPP2 1182 aaPredicted RBP19.48■□□□□ 0.71
NUP50-203ENST00000407019 RBM6P78332 1123 aaKnown RBP19.47■□□□□ 0.71
NUP50-203ENST00000407019 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
NUP50-203ENST00000407019 UBE4AQ14139 1066 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
NUP50-203ENST00000407019 TMTC2Q8N394 836 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 CACTINQ8WUQ7 758 aaKnown RBP19.47■□□□□ 0.71
NUP50-203ENST00000407019 ZKSCAN3Q9BRR0 538 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 FAM13BQ9NYF5 915 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 MAGEB6P1A0A0J9YX57 407 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 SYKP43405 635 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 GYG1P46976 350 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 NLRP12P59046 1061 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 TRIM22Q8IYM9 498 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 PDCL3Q9H2J4 239 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 RAI14Q9P0K7 980 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 ABCF2Q9UG63 623 aa19.47■□□□□ 0.71
NUP50-203ENST00000407019 NEMFO60524 1076 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 GTF2F1P35269 517 aaKnown RBP eCLIP19.46■□□□□ 0.714e-6■■■■□ 25.2
NUP50-203ENST00000407019 RCAN1P53805 252 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 ADGRA1Q86SQ6 560 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 LINC00116Q8NCU8 138 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
NUP50-203ENST00000407019 HPSEQ9Y251 543 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 A0A1B0GUL6 1792 aa19.46■□□□□ 0.71
NUP50-203ENST00000407019 UBE2Q2LH0YL09 131 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 SHC4Q6S5L8 630 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 COL1A1P02452 1464 aaPredicted RBP19.45■□□□□ 0.7
NUP50-203ENST00000407019 FAM237AA0A1B0GTK4 181 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 CCDC196A0A1B0GTZ2 297 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 SAFBQ15424 915 aaKnown RBP eCLIP19.45■□□□□ 0.7
NUP50-203ENST00000407019 CAVIN4Q5BKX8 364 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 MAP7D2Q96T17 732 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 UBAC1Q9BSL1 405 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.45■□□□□ 0.7
NUP50-203ENST00000407019 ANAPC4Q9UJX5 808 aa19.45■□□□□ 0.7
NUP50-203ENST00000407019 CUTAO60888 179 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 MMP1P03956 469 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 RESP18Q5W5W9 173 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 NOSTRINQ8IVI9 506 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 LRRC8AQ8IWT6 810 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 SDR42E1Q8WUS8 393 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 BIN1O00499 593 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 DEXIO95424 95 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 GUCY1A2P33402 732 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 TPM4P67936 248 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 ZNF654Q8IZM8 581 aa19.44■□□□□ 0.7
NUP50-203ENST00000407019 NBPF11Q86T75 865 aa19.43■□□□□ 0.7
NUP50-203ENST00000407019 ESR2Q92731 530 aa19.43■□□□□ 0.7
NUP50-203ENST00000407019 RIOK1Q9BRS2 568 aaKnown RBP19.43■□□□□ 0.7
NUP50-203ENST00000407019 DIS3L2Q8IYB7 885 aaKnown RBP19.42■□□□□ 0.7
NUP50-203ENST00000407019 CRACR2BQ8N4Y2 399 aaPredicted RBP19.42■□□□□ 0.7
NUP50-203ENST00000407019 TUBE1Q9UJT0 475 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 MINPP1Q9UNW1 487 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms