RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GPRC5DQ9NZD1 345 aa24.35■■□□□ 1.49
CHKB-201ENST00000406938 ARPP21Q9UBL0 812 aaPredicted RBP24.35■■□□□ 1.49
CHKB-201ENST00000406938 USP17L12C9JPN9 530 aa24.34■■□□□ 1.49
CHKB-201ENST00000406938 USP17L21D6R901 530 aa24.34■■□□□ 1.49
CHKB-201ENST00000406938 EGFRP00533 1210 aa24.34■■□□□ 1.49
CHKB-201ENST00000406938 NFIAQ12857 509 aa24.34■■□□□ 1.49
CHKB-201ENST00000406938 LAMB1P07942 1786 aa24.34■■□□□ 1.49
CHKB-201ENST00000406938 CYP2D7A0A087X1C5 515 aa24.33■■□□□ 1.49
CHKB-201ENST00000406938 WNT10BO00744 389 aa24.33■■□□□ 1.49
CHKB-201ENST00000406938 PPARAQ07869 468 aa24.33■■□□□ 1.49
CHKB-201ENST00000406938 STOX1Q6ZVD7 989 aa24.33■■□□□ 1.49
CHKB-201ENST00000406938 TBC1D10CQ8IV04 446 aa24.33■■□□□ 1.49
CHKB-201ENST00000406938 MINDY4BA8MYZ0 360 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 KRT32Q14532 448 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 SBK1Q52WX2 424 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 SAMD7Q7Z3H4 446 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 JAKMIP1Q96N16 626 aaKnown RBP24.32■■□□□ 1.48
CHKB-201ENST00000406938 IDI2Q9BXS1 227 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 SAP30BPQ9UHR5 308 aaKnown RBP24.32■■□□□ 1.48
CHKB-201ENST00000406938 CLRN2A0PK11 232 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 E7EWF7 191 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 CYP2D6P10635 497 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 CTDSPL2Q05D32 466 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 RABEP1Q15276 862 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 KIF4BQ2VIQ3 1234 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 SLC4A8Q2Y0W8 1093 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 NBPF9Q3BBW0 867 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 SPDYE2Q495Y8 402 aa24.32■■□□□ 1.48
CHKB-201ENST00000406938 TBC1D10BQ4KMP7 808 aaPredicted RBP24.32■■□□□ 1.48
CHKB-201ENST00000406938 RBM26Q5T8P6 1007 aaKnown RBP24.32■■□□□ 1.48
CHKB-201ENST00000406938 H7C1D1 291 aa24.31■■□□□ 1.48
CHKB-201ENST00000406938 SMIM22K7EJ46 135 aa24.31■■□□□ 1.48
CHKB-201ENST00000406938 EVX2Q03828 476 aa24.31■■□□□ 1.48
CHKB-201ENST00000406938 DPY19L2Q6NUT2 758 aa24.31■■□□□ 1.48
CHKB-201ENST00000406938 OSBPL5Q9H0X9 879 aaPredicted RBP24.31■■□□□ 1.48
CHKB-201ENST00000406938 TMOD2Q9NZR1 351 aa24.31■■□□□ 1.48
CHKB-201ENST00000406938 ZNF70Q9UC06 446 aaPredicted RBP24.31■■□□□ 1.48
CHKB-201ENST00000406938 ANAPC4Q9UJX5 808 aa24.31■■□□□ 1.48
CHKB-201ENST00000406938 MYO1BO43795 1136 aa24.3■■□□□ 1.48
CHKB-201ENST00000406938 CASTP20810 708 aaKnown RBP24.3■■□□□ 1.48
CHKB-201ENST00000406938 EPS15P42566 896 aa24.3■■□□□ 1.48
CHKB-201ENST00000406938 AMOTL1Q8IY63 956 aa24.3■■□□□ 1.48
CHKB-201ENST00000406938 UPF3BQ9BZI7 483 aaKnown RBP24.3■■□□□ 1.48
CHKB-201ENST00000406938 FAM198AQ9UFP1 575 aa24.3■■□□□ 1.48
CHKB-201ENST00000406938 ANP32AP39687 249 aaKnown RBP24.29■■□□□ 1.48
CHKB-201ENST00000406938 C12orf60Q5U649 245 aa24.29■■□□□ 1.48
CHKB-201ENST00000406938 TM6SF1Q9BZW5 370 aa24.29■■□□□ 1.48
CHKB-201ENST00000406938 NPM3O75607 178 aaKnown RBP24.28■■□□□ 1.48
CHKB-201ENST00000406938 POLR3DP05423 398 aaPredicted RBP24.28■■□□□ 1.48
CHKB-201ENST00000406938 PSMA5P28066 241 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 LMOD1P29536 600 aaPredicted RBP24.28■■□□□ 1.48
CHKB-201ENST00000406938 TCP10Q12799 353 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 COL9A3Q14050 684 aaPredicted RBP24.28■■□□□ 1.48
CHKB-201ENST00000406938 STAG1Q8WVM7 1258 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 ROBO3Q96MS0 1386 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 GLTPD2A6NH11 291 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 AKNAD1Q5T1N1 836 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 STK11IPQ8N1F8 1099 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 TRPM4Q8TD43 1214 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 L3MBTL3Q96JM7 780 aaPredicted RBP24.28■■□□□ 1.48
CHKB-201ENST00000406938 NEK1Q96PY6 1258 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 VEZTQ9HBM0 779 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 TACC3Q9Y6A5 838 aa24.28■■□□□ 1.48
CHKB-201ENST00000406938 NEDD4P46934 1319 aa24.27■■□□□ 1.48
CHKB-201ENST00000406938 DCAF8L1A6NGE4 600 aa24.27■■□□□ 1.48
CHKB-201ENST00000406938 CPA1P15085 419 aa24.27■■□□□ 1.48
CHKB-201ENST00000406938 PLCD1P51178 756 aa24.27■■□□□ 1.48
CHKB-201ENST00000406938 ZFPM1Q8IX07 1006 aa24.27■■□□□ 1.48
CHKB-201ENST00000406938 ZSWIM6Q9HCJ5 1215 aa24.27■■□□□ 1.48
CHKB-201ENST00000406938 MYH1P12882 1939 aa24.26■■□□□ 1.47
CHKB-201ENST00000406938 TCP10L2B9ZVM9 353 aa24.26■■□□□ 1.47
CHKB-201ENST00000406938 ENTPD3O75355 529 aa24.26■■□□□ 1.47
CHKB-201ENST00000406938 NEK4P51957 841 aa24.26■■□□□ 1.47
CHKB-201ENST00000406938 BLOC1S2Q6QNY1 142 aa24.26■■□□□ 1.47
CHKB-201ENST00000406938 INCENPQ9NQS7 918 aa24.26■■□□□ 1.47
CHKB-201ENST00000406938 MFSD6Q6ZSS7 791 aa24.25■■□□□ 1.47
CHKB-201ENST00000406938 RUFY3Q7L099 469 aa24.25■■□□□ 1.47
CHKB-201ENST00000406938 RNF41Q9H4P4 317 aaPredicted RBP24.25■■□□□ 1.47
CHKB-201ENST00000406938 CYP46A1Q9Y6A2 500 aa24.25■■□□□ 1.47
CHKB-201ENST00000406938 ASTN2O75129 1339 aaPredicted RBP24.25■■□□□ 1.47
CHKB-201ENST00000406938 COL2A1P02458 1487 aaPredicted RBP24.25■■□□□ 1.47
CHKB-201ENST00000406938 SLC3A2P08195 630 aaKnown RBP24.24■■□□□ 1.47
CHKB-201ENST00000406938 TRDNQ13061 729 aa24.24■■□□□ 1.47
CHKB-201ENST00000406938 FKBP1CQ5VVH2 108 aa24.24■■□□□ 1.47
CHKB-201ENST00000406938 RALYLQ86SE5 291 aaKnown RBP24.24■■□□□ 1.47
CHKB-201ENST00000406938 NCOA7Q8NI08 942 aa24.24■■□□□ 1.47
CHKB-201ENST00000406938 CNTNAP1P78357 1384 aa24.24■■□□□ 1.47
CHKB-201ENST00000406938 HMGB1P09429 215 aaKnown RBP24.24■■□□□ 1.47
CHKB-201ENST00000406938 TTC6Q86TZ1 520 aa24.24■■□□□ 1.47
CHKB-201ENST00000406938 DYNLL2Q96FJ2 89 aa24.24■■□□□ 1.47
CHKB-201ENST00000406938 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
CHKB-201ENST00000406938 RPS6KB1P23443 525 aa24.23■■□□□ 1.47
CHKB-201ENST00000406938 SH3BP5LQ7L8J4 393 aa24.23■■□□□ 1.47
CHKB-201ENST00000406938 MB21D2Q8IYB1 491 aaPredicted RBP24.23■■□□□ 1.47
CHKB-201ENST00000406938 DHX36Q9H2U1 1008 aaKnown RBP24.23■■□□□ 1.47
CHKB-201ENST00000406938 CNNM2Q9H8M5 875 aa24.23■■□□□ 1.47
CHKB-201ENST00000406938 TOMM22Q9NS69 142 aa24.23■■□□□ 1.47
CHKB-201ENST00000406938 HACL1Q9UJ83 578 aa24.23■■□□□ 1.47
CHKB-201ENST00000406938 ATRNL1Q5VV63 1379 aa24.23■■□□□ 1.47
CHKB-201ENST00000406938 DDTLA6NHG4 134 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms