RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 RNMTO43148 476 aaKnown RBP15.42■□□□□ 0.06
VAPA-202ENST00000400000 KCNA6P17658 529 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 TNFAIP3P21580 790 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 SEL1L2Q5TEA6 688 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 ANKRD2Q9GZV1 360 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 FAM204AQ9H8W3 233 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 VIMP08670 466 aaKnown RBP15.42■□□□□ 0.06
VAPA-202ENST00000400000 SCNN1DP51172 638 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 EYA1Q99502 592 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 BLZF1Q9H2G9 400 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 CCDC171Q6TFL3 1326 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 FMNL3Q8IVF7 1028 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 CALCOCO1Q9P1Z2 691 aa15.42■□□□□ 0.06
VAPA-202ENST00000400000 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 KRT86O43790 486 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 MAN1A1P33908 653 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 OTUD7AQ8TE49 926 aaPredicted RBP15.41■□□□□ 0.06
VAPA-202ENST00000400000 POLR2DO15514 142 aaKnown RBP15.41■□□□□ 0.06
VAPA-202ENST00000400000 LMBR1Q8WVP7 490 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 GTF3C6Q969F1 213 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
VAPA-202ENST00000400000 PPIP5K2O43314 1243 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 SLU7O95391 586 aaKnown RBP15.41■□□□□ 0.06
VAPA-202ENST00000400000 INF2Q27J81 1249 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 CEP85Q6P2H3 762 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 PRXQ9BXM0 1461 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 MYCT1Q8N699 235 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 AFG3L2Q9Y4W6 797 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
VAPA-202ENST00000400000 GCNT3O95395 438 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 ARHGEF10LQ9HCE6 1279 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 KCNJ14Q9UNX9 436 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 PAXBP1Q9Y5B6 917 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 PLCG2P16885 1265 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 GNAT2P19087 354 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 FAM227BQ96M60 508 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 CAPN2P17655 700 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 RLBP1P12271 317 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 KCNQ4P56696 695 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 ARHGAP44Q17R89 818 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 KRT83P78385 493 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 ARHGEF35A5YM69 484 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 HOXC9P31274 260 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 IFT74Q96LB3 600 aa15.4■□□□□ 0.06
VAPA-202ENST00000400000 KMT5BQ4FZB7 885 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 MSANTD4Q8NCY6 345 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 SYNJ2BP-COX16A0A087WUM0 186 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 CCDC121Q6ZUS5 278 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 COX16Q9P0S2 106 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 PRPHP41219 470 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 FAM200AQ8TCP9 573 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 BMP15O95972 392 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 SATB1Q01826 763 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 Q3C1V9 767 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 NCOA1Q15788 1441 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 ANKS4BQ8N8V4 417 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 MED10Q9BTT4 135 aa15.39■□□□□ 0.05
VAPA-202ENST00000400000 SPDYE16A6NNV3 312 aaPredicted RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 IGBP1P78318 339 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 LUC7L2Q9Y383 392 aaKnown RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 IRX3P78415 501 aaPredicted RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 KLHL40Q2TBA0 621 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 RPUSD2Q8IZ73 545 aaKnown RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 DENND2AQ9ULE3 1009 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 SMTNP53814 917 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 CCDC14Q49A88 953 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 CD19P15391 556 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 ATP2A2P16615 1042 aaKnown RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 DIXDC1Q155Q3 683 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 TPH2Q8IWU9 490 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 C17orf53Q8N3J3 647 aaPredicted RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 GTF2IP78347 998 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
VAPA-202ENST00000400000 DHX29Q7Z478 1369 aaKnown RBP15.38■□□□□ 0.05
VAPA-202ENST00000400000 PPP1R12AO14974 1030 aaPredicted RBP15.37■□□□□ 0.05
VAPA-202ENST00000400000 SEC24BO95487 1268 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 ASIC2Q16515 512 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 HINFPQ9BQA5 517 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 SLC8A3P57103 927 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 MGARPQ8TDB4 240 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms