RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PHEXP78562 749 aa9.31□□□□□ -0.92
CHD8-201ENST00000399982 C20orf194Q5TEA3 1177 aa9.31□□□□□ -0.92
CHD8-201ENST00000399982 ANKRD20A3Q5VUR7 823 aa9.31□□□□□ -0.92
CHD8-201ENST00000399982 LMOD1P29536 600 aaPredicted RBP9.31□□□□□ -0.92
CHD8-201ENST00000399982 RUNDC3BQ96NL0 473 aa9.31□□□□□ -0.92
CHD8-201ENST00000399982 IL1RAPL2Q9NP60 686 aa9.31□□□□□ -0.92
CHD8-201ENST00000399982 ATP6V0A2Q9Y487 856 aa9.31□□□□□ -0.92
CHD8-201ENST00000399982 SPDYE16A6NNV3 312 aaPredicted RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 SPDYE2Q495Y8 402 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 TTLL3Q9Y4R7 772 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 ETF1P62495 437 aaKnown RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 IQUBQ8NA54 791 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 LEO1Q8WVC0 666 aaPredicted RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 CNOT10Q9H9A5 744 aaKnown RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 CALM1P0DP23 149 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 CALM2P0DP24 149 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 CALM3P0DP25 149 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 UBXN1Q04323 297 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 DNM1Q05193 864 aaKnown RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 SECISBP2LQ93073 1101 aaKnown RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 FAM204AQ9H8W3 233 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 IGSF3O75054 1194 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 PLCB4Q15147 1175 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 BCAS4Q8TDM0 211 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 NAP1L4Q99733 375 aaKnown RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 CENPKQ9BS16 269 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 AQRO60306 1485 aaKnown RBP eCLIP9.3□□□□□ -0.926e-7■■■■■ 28.2
CHD8-201ENST00000399982 FGD5Q6ZNL6 1462 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 FAM180AQ6UWF9 173 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 TRIM58Q8NG06 486 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 BATF3Q9NR55 127 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 TRIM37O94972 964 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 MAN1A1P33908 653 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 RPS6KA2Q15349 733 aa9.3□□□□□ -0.92
CHD8-201ENST00000399982 SPOUT1Q5T280 376 aaKnown RBP9.3□□□□□ -0.92
CHD8-201ENST00000399982 IFIT3O14879 490 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 KRT5P13647 590 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 CCT2P78371 535 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 ZSCAN32Q9NX65 697 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 CTTNBP2NLQ9P2B4 639 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 PHLPP2Q6ZVD8 1323 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 SLC4A1P02730 911 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 FBXW4P57775 412 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 STK24Q9Y6E0 443 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 NSD3Q9BZ95 1437 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 SDSP20132 328 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 HPDP32754 393 aaPredicted RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 SRGAP1Q7Z6B7 1085 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 CCDC84Q86UT8 332 aaPredicted RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 SLF2Q8IX21 1173 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 ANKRD44Q8N8A2 993 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 IFIT1P09914 478 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 GNGT1P63211 74 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 C4orf50Q6ZRC1 276 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 PODNQ7Z5L7 613 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 C9orf84Q5VXU9 1444 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 RPL13P26373 211 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 BLVRAP53004 296 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 ESRRGP62508 458 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 PPP2R5AQ15172 486 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
CHD8-201ENST00000399982 CABP5Q9NP86 173 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 OPHN1O60890 802 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 SUN1O94901 812 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 KRT3P12035 628 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 PDE6AP16499 860 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 DENND2CQ68D51 928 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 IGSF22Q8N9C0 903 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 PIK3R4Q99570 1358 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 MCM7P33993 719 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 ZBTB21Q9ULJ3 1066 aa9.29□□□□□ -0.92
CHD8-201ENST00000399982 SSH2Q76I76 1423 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 NFKBIL1Q9UBC1 381 aaPredicted RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 SAR1BQ9Y6B6 198 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 SCINQ9Y6U3 715 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 PPARDQ03181 441 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 ACBD5Q5T8D3 534 aaPredicted RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 SPDL1Q96EA4 605 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 SPATA17Q96L03 361 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 GIMAP4Q9NUV9 329 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 RNF14Q9UBS8 474 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 SPG7Q9UQ90 795 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 IGHDP01880 384 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 TCP1P17987 556 aaKnown RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 GDAP1L1Q96MZ0 367 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 YY1AP1Q9H869 796 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 RPRD2Q5VT52 1461 aaKnown RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 PTPRGP23470 1445 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 TDRD9Q8NDG6 1382 aaKnown RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 PDE1AP54750 535 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms