RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 AFMP43652 599 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 GAS2L3Q86XJ1 694 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
SCAF4-202ENST00000399804 USP28Q96RU2 1077 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 TNKSO95271 1327 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 XDHP47989 1333 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 CALML3P27482 149 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 ALDH1B1P30837 517 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 FAM160A1Q05DH4 1040 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
SCAF4-202ENST00000399804 BMP15O95972 392 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
SCAF4-202ENST00000399804 EIF6P56537 245 aaKnown RBP16.09■□□□□ 0.17
SCAF4-202ENST00000399804 ZNF830Q96NB3 372 aaPredicted RBP16.09■□□□□ 0.17
SCAF4-202ENST00000399804 PIK3C2AO00443 1686 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 APOA5Q6Q788 366 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 LUZP1Q86V48 1076 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 FSD2A1L4K1 749 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 LIG1P18858 919 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 FANCBQ8NB91 859 aa16.09■□□□□ 0.17
SCAF4-202ENST00000399804 SEMA3EO15041 775 aa16.08■□□□□ 0.17
SCAF4-202ENST00000399804 HSPA1LP34931 641 aa16.08■□□□□ 0.17
SCAF4-202ENST00000399804 DOK7Q18PE1 504 aa16.08■□□□□ 0.17
SCAF4-202ENST00000399804 RILPL1Q5EBL4 403 aa16.08■□□□□ 0.17
SCAF4-202ENST00000399804 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.17
SCAF4-202ENST00000399804 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.17
SCAF4-202ENST00000399804 KANK3Q6NY19 840 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 KRI1Q8N9T8 703 aaKnown RBP16.08■□□□□ 0.16
SCAF4-202ENST00000399804 PKNOX2Q96KN3 472 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 FEZ1Q99689 392 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCAF4-202ENST00000399804 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 DHX58Q96C10 678 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 GPR101Q96P66 508 aaPredicted RBP16.08■□□□□ 0.16
SCAF4-202ENST00000399804 RAB34Q9BZG1 259 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
SCAF4-202ENST00000399804 ARPP21Q9UBL0 812 aaPredicted RBP16.08■□□□□ 0.16
SCAF4-202ENST00000399804 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
SCAF4-202ENST00000399804 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 MCM7P33993 719 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 PDE6BP35913 854 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 HSP90AA4PQ58FG1 418 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 EPS15P42566 896 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 ZNF174Q15697 407 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
SCAF4-202ENST00000399804 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 ZSCAN10Q96SZ4 725 aaPredicted RBP16.07■□□□□ 0.16
SCAF4-202ENST00000399804 VPS54Q9P1Q0 977 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 HDAC9Q9UKV0 1011 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.07■□□□□ 0.16
SCAF4-202ENST00000399804 FMN2Q9NZ56 1722 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 BBOX1O75936 387 aa16.07■□□□□ 0.16
SCAF4-202ENST00000399804 ZMYM6O95789 1325 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 GRAPQ13588 217 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
SCAF4-202ENST00000399804 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
SCAF4-202ENST00000399804 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
SCAF4-202ENST00000399804 INCENPQ9NQS7 918 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 MYO1BO43795 1136 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 SPECC1Q5M775 1068 aa16.06■□□□□ 0.16
SCAF4-202ENST00000399804 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
SCAF4-202ENST00000399804 NOC3LQ8WTT2 800 aaKnown RBP16.06■□□□□ 0.16
SCAF4-202ENST00000399804 TCP10Q12799 353 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 CASP7P55210 303 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-202ENST00000399804 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-202ENST00000399804 RXRBP28702 533 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 NFIXQ14938 502 aa16.05■□□□□ 0.16
SCAF4-202ENST00000399804 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-202ENST00000399804 IDEP14735 1019 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 BTDP43251 543 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 SCNN1DP51172 638 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
SCAF4-202ENST00000399804 ZMYND15Q9H091 742 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 ZNF609O15014 1411 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 NFAT5O94916 1531 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 TOP1P11387 765 aaKnown RBP16.04■□□□□ 0.16
SCAF4-202ENST00000399804 LMOD1P29536 600 aaPredicted RBP16.04■□□□□ 0.16
SCAF4-202ENST00000399804 PRDX5P30044 214 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 MECOMQ03112 1051 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms