RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
CYLD-202ENST00000398568 MRPL44Q9H9J2 332 aaKnown RBP17.1■□□□□ 0.33
CYLD-202ENST00000398568 GPTP24298 496 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 SPECC1LQ69YQ0 1117 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 AACSQ86V21 672 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
CYLD-202ENST00000398568 KIF3CO14782 793 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 SPTLC2O15270 562 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
CYLD-202ENST00000398568 IRAK1P51617 712 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 RABEP2Q9H5N1 569 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 LRP6O75581 1613 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 GOLGA6CA6NDK9 693 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 GOLGA6DP0CG33 693 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 NSUN7Q8NE18 718 aaKnown RBP17.09■□□□□ 0.33
CYLD-202ENST00000398568 KAT14Q9H8E8 782 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 GOLGA6AQ9NYA3 693 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
CYLD-202ENST00000398568 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.33
CYLD-202ENST00000398568 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.33
CYLD-202ENST00000398568 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.33
CYLD-202ENST00000398568 B4GALNT4Q76KP1 1039 aa17.08■□□□□ 0.33
CYLD-202ENST00000398568 TC2NQ8N9U0 490 aa17.08■□□□□ 0.33
CYLD-202ENST00000398568 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.33
CYLD-202ENST00000398568 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 PRPF6O94906 941 aaKnown RBP17.08■□□□□ 0.32
CYLD-202ENST00000398568 LRRC2Q9BYS8 371 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 ODF2LQ9ULJ1 636 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 EP400Q96L91 3159 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 MAP2K1Q02750 393 aaPredicted RBP17.08■□□□□ 0.32
CYLD-202ENST00000398568 DDR1Q08345 913 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 LINC00301Q8NCQ3 95 aa17.08■□□□□ 0.32
CYLD-202ENST00000398568 PFKFB2O60825 505 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 IP6K1Q92551 441 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 NAPGQ99747 312 aaPredicted RBP17.07■□□□□ 0.32
CYLD-202ENST00000398568 ERCC3P19447 782 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
CYLD-202ENST00000398568 TBC1D22AQ8WUA7 517 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 HSD3B7Q9H2F3 369 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 CRB1P82279 1406 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 NRKQ7Z2Y5 1582 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 WDR93Q6P2C0 686 aa17.07■□□□□ 0.32
CYLD-202ENST00000398568 SHOX2O60902 331 aaPredicted RBP17.06■□□□□ 0.32
CYLD-202ENST00000398568 TBX2Q13207 712 aaPredicted RBP17.06■□□□□ 0.32
CYLD-202ENST00000398568 BIRC2Q13490 618 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 FAM182BQ5T319 152 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
CYLD-202ENST00000398568 HPCAL4Q9UM19 191 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 YEATS4O95619 227 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 GNGT1P63211 74 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 RNF217Q8TC41 542 aa17.06■□□□□ 0.32
CYLD-202ENST00000398568 AKR1B15C9JRZ8 316 aaPredicted RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 GCFC2P16383 781 aaKnown RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 SYKP43405 635 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 MTF1Q14872 753 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 NBPF20Q3BBV1 942 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 PPFIBP1Q86W92 1011 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 CENPHQ9H3R5 247 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 SAMM50Q9Y512 469 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 MYO1FO00160 1098 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 POLR3DP05423 398 aaPredicted RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 PFKFB1P16118 471 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 CD248Q9HCU0 757 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 MCM8Q9UJA3 840 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 ALS2Q96Q42 1657 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 SOWAHDA6NJG2 315 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 CDR1P51861 262 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
CYLD-202ENST00000398568 MICALCLQ6ZW33 695 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 EYA1Q99502 592 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 ADGRG1Q9Y653 693 aa17.05■□□□□ 0.32
CYLD-202ENST00000398568 TMCO5BA8MYB1 307 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 GGCXP38435 758 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 ARHGAP25P42331 645 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 ZKSCAN4Q969J2 545 aaPredicted RBP17.04■□□□□ 0.32
CYLD-202ENST00000398568 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
CYLD-202ENST00000398568 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
CYLD-202ENST00000398568 NOA1Q8NC60 698 aaKnown RBP17.04■□□□□ 0.32
CYLD-202ENST00000398568 COG1Q8WTW3 980 aa17.04■□□□□ 0.32
CYLD-202ENST00000398568 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.04■□□□□ 0.32
CYLD-202ENST00000398568 EIF3HO15372 352 aaKnown RBP eCLIP17.03■□□□□ 0.32
CYLD-202ENST00000398568 CMA1P23946 247 aa17.03■□□□□ 0.32
CYLD-202ENST00000398568 SPATS2Q86XZ4 545 aaKnown RBP17.03■□□□□ 0.32
CYLD-202ENST00000398568 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms