RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 CHMP4CQ96CF2 233 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 LMBRD1Q9NUN5 540 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 ISY1Q9ULR0 285 aaKnown RBP21.62■■□□□ 1.05
MBD1-208ENST00000398493 MYH7P12883 1935 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 PDCP20941 246 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 CRKP46108 304 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 Q6ZUG5 572 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 MAGEB6Q8N7X4 407 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 TRPM4Q8TD43 1214 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 PUS7LQ9H0K6 701 aaKnown RBP21.62■■□□□ 1.05
MBD1-208ENST00000398493 MYOZ2Q9NPC6 264 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 GOLGA6L3A6NEY3 463 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 E7EWF7 191 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 GPAA1O43292 621 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 PRPF40AO75400 957 aaKnown RBP21.61■■□□□ 1.05
MBD1-208ENST00000398493 ZSCAN22P10073 491 aaPredicted RBP21.61■■□□□ 1.05
MBD1-208ENST00000398493 SYT1P21579 422 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 YY1P25490 414 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 HIRAP54198 1017 aaPredicted RBP21.61■■□□□ 1.05
MBD1-208ENST00000398493 TCEANC2Q96MN5 208 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 HACL1Q9UJ83 578 aa21.61■■□□□ 1.05
MBD1-208ENST00000398493 H7C1D1 291 aa21.6■■□□□ 1.05
MBD1-208ENST00000398493 LMOD1P29536 600 aaPredicted RBP21.6■■□□□ 1.05
MBD1-208ENST00000398493 CFAP100Q494V2 611 aa21.6■■□□□ 1.05
MBD1-208ENST00000398493 NECAB1Q8N987 351 aa21.6■■□□□ 1.05
MBD1-208ENST00000398493 SERPINA10Q9UK55 444 aa21.6■■□□□ 1.05
MBD1-208ENST00000398493 HDAC9Q9UKV0 1011 aa21.6■■□□□ 1.05
MBD1-208ENST00000398493 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
MBD1-208ENST00000398493 TCRBV5S4A2TA0A5A2 114 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 PDE6AP16499 860 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 PRMT6Q96LA8 375 aaPredicted RBP21.59■■□□□ 1.05
MBD1-208ENST00000398493 TAF1DQ9H5J8 278 aaPredicted RBP21.59■■□□□ 1.05
MBD1-208ENST00000398493 DAGLAQ9Y4D2 1042 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 EPHX2P34913 555 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 RBM5P52756 815 aaKnown RBP eCLIP21.59■■□□□ 1.05
MBD1-208ENST00000398493 NBPF9Q3BBW0 867 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 NAA16Q6N069 864 aaPredicted RBP21.59■■□□□ 1.05
MBD1-208ENST00000398493 STOX1Q6ZVD7 989 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 MRIQ9BWK5 157 aa21.59■■□□□ 1.05
MBD1-208ENST00000398493 ADAMTSL1Q8N6G6 1762 aa21.58■■□□□ 1.05
MBD1-208ENST00000398493 FGAP02671 866 aa21.58■■□□□ 1.05
MBD1-208ENST00000398493 CYP7A1P22680 504 aa21.58■■□□□ 1.05
MBD1-208ENST00000398493 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.05
MBD1-208ENST00000398493 TEKT1Q969V4 418 aa21.58■■□□□ 1.05
MBD1-208ENST00000398493 ZBED3Q96IU2 234 aaPredicted RBP21.58■■□□□ 1.05
MBD1-208ENST00000398493 ADARB2Q9NS39 739 aaKnown RBP21.58■■□□□ 1.05
MBD1-208ENST00000398493 ASTN2O75129 1339 aaPredicted RBP21.58■■□□□ 1.05
MBD1-208ENST00000398493 ZNF532Q9HCE3 1301 aa21.58■■□□□ 1.05
MBD1-208ENST00000398493 WNT10BO00744 389 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 ZNF213O14771 459 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 NCLP19338 710 aaKnown RBP21.57■■□□□ 1.04
MBD1-208ENST00000398493 HDLBPQ00341 1268 aaKnown RBP21.57■■□□□ 1.04
MBD1-208ENST00000398493 EXOSC10Q01780 885 aaKnown RBP21.57■■□□□ 1.04
MBD1-208ENST00000398493 KIF4BQ2VIQ3 1234 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 HHIPL2Q6UWX4 724 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 FAM163AQ96GL9 167 aaPredicted RBP21.57■■□□□ 1.04
MBD1-208ENST00000398493 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 GAKO14976 1311 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 IQCA1LA6NCM1 817 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 POTEIP0CG38 1075 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 POTEJP0CG39 1038 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 VEGFAP15692 232 aaPredicted RBP21.57■■□□□ 1.04
MBD1-208ENST00000398493 LARP1BQ659C4 914 aaKnown RBP21.57■■□□□ 1.04
MBD1-208ENST00000398493 AIDAQ96BJ3 306 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 ZDHHC15Q96MV8 337 aa21.57■■□□□ 1.04
MBD1-208ENST00000398493 SPDYE2BA6NHP3 402 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 MBD3O95983 291 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 SPDYE6P0CI01 402 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 DLGAP5Q15398 846 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 MIGA1Q8NAN2 632 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 MTMR14Q8NCE2 650 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 BRF1Q92994 677 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 MROH7-TTC4A0A0A0MT08 1334 aa21.56■■□□□ 1.04
MBD1-208ENST00000398493 F13A1P00488 732 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 ST3GAL1Q11201 340 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 STK3Q13188 491 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 COL9A3Q14050 684 aaPredicted RBP21.55■■□□□ 1.04
MBD1-208ENST00000398493 GTF3C6Q969F1 213 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 GPBP1L1Q9HC44 474 aaPredicted RBP21.55■■□□□ 1.04
MBD1-208ENST00000398493 GPR75-ASB3A0A0A6YYF3 556 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 APPP05067 770 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 BTDP43251 543 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 DYNLL1P63167 89 aaKnown RBP21.55■■□□□ 1.04
MBD1-208ENST00000398493 GSTO1P78417 241 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 FBXL16Q8N461 479 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 NCOA7Q8NI08 942 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 AGXT2Q9BYV1 514 aa21.55■■□□□ 1.04
MBD1-208ENST00000398493 AATFQ9NY61 560 aaKnown RBP eCLIP21.55■■□□□ 1.04
MBD1-208ENST00000398493 SCAF8Q9UPN6 1271 aaKnown RBP21.55■■□□□ 1.04
MBD1-208ENST00000398493 MMP14P50281 582 aa21.54■■□□□ 1.04
MBD1-208ENST00000398493 TRDNQ13061 729 aa21.54■■□□□ 1.04
MBD1-208ENST00000398493 CSPP1Q1MSJ5 1256 aa21.54■■□□□ 1.04
MBD1-208ENST00000398493 EAPPQ56P03 285 aaPredicted RBP21.54■■□□□ 1.04
MBD1-208ENST00000398493 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
MBD1-208ENST00000398493 ZNF784Q8NCA9 323 aaPredicted RBP21.54■■□□□ 1.04
MBD1-208ENST00000398493 LLPHQ9BRT6 129 aaKnown RBP21.54■■□□□ 1.04
MBD1-208ENST00000398493 TDRD3Q9H7E2 651 aaKnown RBP21.54■■□□□ 1.04
MBD1-208ENST00000398493 FSD2A1L4K1 749 aa21.53■■□□□ 1.04
MBD1-208ENST00000398493 IGSF3O75054 1194 aa21.53■■□□□ 1.04
MBD1-208ENST00000398493 USP50Q70EL3 339 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms