RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZSCAN12O43309 604 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 SEC31AO94979 1220 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 FBXO18Q8NFZ0 1043 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CCDC12Q8WUD4 166 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 VAT1LQ9HCJ6 419 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 FANCLQ9NW38 375 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 PUF60Q9UHX1 559 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 ANGEL1Q9UNK9 670 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 PCDHA5Q9Y5H7 936 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 QRICH2Q9H0J4 1663 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CDC25BP30305 580 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 TNNT3P45378 269 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 USP5P45974 858 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 SLC39A14Q15043 492 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 APOA5Q6Q788 366 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 TMCO3Q6UWJ1 677 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 SDR42E1Q8WUS8 393 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 ERO1AQ96HE7 468 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CARMIL3Q8ND23 1372 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 C1orf167Q5SNV9 1468 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CYP2D7A0A087X1C5 515 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 KRBA2Q6ZNG9 492 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.64□□□□□ -1.511e-6■□□□□ 10.8
SMAD4-202ENST00000398417 COL15A1P39059 1388 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CAVIN2O95810 425 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 PUM3Q15397 648 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 AKNAD1Q5T1N1 836 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CCDC47Q96A33 483 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 KDM6AO15550 1401 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 ADKP55263 362 aaKnown RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CCZ1BP86790 482 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 CCZ1P86791 482 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-202ENST00000398417 IQCB1Q15051 598 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 VPS54Q9P1Q0 977 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 PCDHB6Q9Y5E3 794 aa5.64□□□□□ -1.51
SMAD4-202ENST00000398417 GUCY1A2P33402 732 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CHRNDQ07001 517 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 UBE3CQ15386 1083 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CNNM2Q9H8M5 875 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 SPTLC3Q9NUV7 552 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 SHPRHQ149N8 1683 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 PIP4K2BP78356 416 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 KIF4BQ2VIQ3 1234 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 NLRP10Q86W26 655 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 HPS5Q9UPZ3 1129 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CASP1P29466 404 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 SHC4Q6S5L8 630 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 AMOTL1Q8IY63 956 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CTCFLQ8NI51 663 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CNKSR2Q8WXI2 1034 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 EPC1Q9H2F5 836 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 TAB2Q9NYJ8 693 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 PXDNLA1KZ92 1463 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 TSPY2A6NKD2 308 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ZRSR2Q15696 482 aaKnown RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ANKRD20A12PQ8NF67 263 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 PPP1R13BQ96KQ4 1090 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 LZTFL1Q9NQ48 299 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 FAM205CA6NFA0 338 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 TRIM75PA6NK02 468 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 KIF2AO00139 706 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 PDE4BQ07343 736 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 SARM1Q6SZW1 724 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CATIPQ7Z7H3 387 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ENGASEQ8NFI3 743 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 STRBPQ96SI9 672 aaKnown RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 SLAIN2Q9P270 581 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 CTNND2Q9UQB3 1225 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 RIMBP3CA6NJZ7 1639 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 RIMBP3BA6NNM3 1639 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 RIMBP3Q9UFD9 1639 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 PDE8BO95263 885 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 FMNL1O95466 1100 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 NCAPD2Q15021 1401 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ESR2Q92731 530 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 MAN1B1Q9UKM7 699 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF335Q9H4Z2 1342 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 DEXIO95424 95 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 KRT2P35908 639 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 NCBP1Q09161 790 aaKnown RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 ERCC6LQ2NKX8 1250 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 IFIT1BQ5T764 474 aaKnown RBP5.63□□□□□ -1.51
SMAD4-202ENST00000398417 NFE2L3Q9Y4A8 694 aa5.63□□□□□ -1.51
SMAD4-202ENST00000398417 TMEM131LA2VDJ0 1609 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 GTF2F1P35269 517 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 NR5A1Q13285 461 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 BMS1Q14692 1282 aaKnown RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 DESI2Q9BSY9 194 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 VPS16Q9H269 839 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 EPB41L4AQ9HCS5 686 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 SAP30BPQ9UHR5 308 aaKnown RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 MAPK8IP1Q9UQF2 711 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CEP152O94986 1710 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 USP32Q8NFA0 1604 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CSF1RP07333 972 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 MCM7P33993 719 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 ILDR1Q86SU0 546 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF654Q8IZM8 581 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms