RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 FBXW10Q5XX13 1052 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 PNKPQ96T60 521 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
PUM3-202ENST00000397885 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 FSBPO95073 299 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 NF2P35240 595 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 PTH1RQ03431 593 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 BAG1Q99933 345 aaPredicted RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 JPH2Q9BR39 696 aaPredicted RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 SNRKQ9NRH2 765 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 SCP2P22307 547 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 SSR1P43307 286 aaKnown RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 UBASH3AP57075 661 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
PUM3-202ENST00000397885 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 BRF1Q92994 677 aa13.12□□□□□ -0.31
PUM3-202ENST00000397885 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 SYF2O95926 243 aaKnown RBP13.11□□□□□ -0.31
PUM3-202ENST00000397885 PTF1AQ7RTS3 328 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
PUM3-202ENST00000397885 LLPHQ9BRT6 129 aaKnown RBP13.11□□□□□ -0.31
PUM3-202ENST00000397885 H0YHG0 523 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 HIP1O00291 1037 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 SARNPP82979 210 aaKnown RBP13.11□□□□□ -0.31
PUM3-202ENST00000397885 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
PUM3-202ENST00000397885 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
PUM3-202ENST00000397885 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
PUM3-202ENST00000397885 ANKRD33BA6NCL7 494 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 TOB2Q14106 344 aaPredicted RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 RHPN1Q8TCX5 695 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 EYA1Q99502 592 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 HMG20BQ9P0W2 317 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 RBM8AQ9Y5S9 174 aaKnown RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 KCNQ2O43526 872 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 CCT5P48643 541 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 FNTAP49354 379 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 VSNL1P62760 191 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 CPLX2Q6PUV4 134 aaKnown RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 YTHDF3Q7Z739 585 aaKnown RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 RAPGEF4Q8WZA2 1011 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
PUM3-202ENST00000397885 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
PUM3-202ENST00000397885 PHACTR2O75167 634 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
PUM3-202ENST00000397885 TATP17735 454 aaPredicted RBP13.09□□□□□ -0.31
PUM3-202ENST00000397885 IRAK1P51617 712 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 PPFIA1Q13136 1202 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 POLA2Q14181 598 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 PLEKHA4Q9H4M7 779 aa13.09□□□□□ -0.31
PUM3-202ENST00000397885 SLC27A2O14975 620 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 DTNBO60941 627 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 SERPINC1P01008 464 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 CCDC175P0C221 793 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 ARHGAP25P42331 645 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 PLCB4Q15147 1175 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 TXNRD1Q16881 649 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.31
PUM3-202ENST00000397885 BTAF1O14981 1849 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 CTAGE15A4D2H0 777 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 KIF5CO60282 957 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 SLC3A2P08195 630 aaKnown RBP13.08□□□□□ -0.32
PUM3-202ENST00000397885 CTAGE8P0CG41 777 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 MYL5Q02045 173 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 CTAGE6Q86UF2 777 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 CTAGE4Q8IX94 777 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 PROM2Q8N271 834 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 IGSF22Q8N9C0 903 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 MAGEC3Q8TD91 643 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
PUM3-202ENST00000397885 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
PUM3-202ENST00000397885 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 SUGCTQ9HAC7 445 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms