RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM87BQ96K49 555 aa12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 USP17L21D6R901 530 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 USP5P45974 858 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 SNW1Q13573 536 aaKnown RBP12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 RNF41Q9H4P4 317 aaPredicted RBP12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 PPARAQ07869 468 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 CATIPQ7Z7H3 387 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 NLRP3Q96P20 1036 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.49
CPSF1P1-201ENST00000397477 GSG1L2A8MUP6 293 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 ATP1A3P13637 1013 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 UBASH3AP57075 661 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 ZNF174Q15697 407 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 CELF1Q92879 486 aaKnown RBP12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 FOXN1O15353 648 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 NAA30Q147X3 362 aaPredicted RBP12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 ZNF654Q8IZM8 581 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 WASF1Q92558 559 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 MCM9Q9NXL9 1143 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 TNKSO95271 1327 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 CCDC196A0A1B0GTZ2 297 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 FMR1NBQ8N0W7 255 aaPredicted RBP12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 HOOK1Q9UJC3 728 aaKnown RBP12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
CPSF1P1-201ENST00000397477 SMTNL1A8MU46 457 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 YEATS4O95619 227 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
CPSF1P1-201ENST00000397477 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 ZNF34Q8IZ26 560 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 MYRIPQ8NFW9 859 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 PLA2G12BQ9BX93 195 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 NBPF3Q9H094 633 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 CDHR2Q9BYE9 1310 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 NMT2O60551 498 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 NLRP5P59047 1200 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 PDCL2Q8N4E4 241 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 CTCFLQ8NI51 663 aaPredicted RBP12□□□□□ -0.49
CPSF1P1-201ENST00000397477 OXER1Q8TDS5 423 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 PLIN2Q99541 437 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 MKNK2Q9HBH9 465 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 KDM4FA0A1W2PPD8 638 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 USP27XA6NNY8 438 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 CASP1P29466 404 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 DHX8Q14562 1220 aaKnown RBP12□□□□□ -0.49
CPSF1P1-201ENST00000397477 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
CPSF1P1-201ENST00000397477 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 PRIMPOLQ96LW4 560 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
CPSF1P1-201ENST00000397477 BRMS1Q9HCU9 246 aa12□□□□□ -0.49
CPSF1P1-201ENST00000397477 KLRK1P26718 216 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 SLC39A14Q15043 492 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 LONRF3Q496Y0 759 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 FANCBQ8NB91 859 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 SAP30BPQ9UHR5 308 aaKnown RBP11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 IGSF3O75054 1194 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 IQCB1Q15051 598 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 LRRC8AQ8IWT6 810 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 POLR3EQ9NVU0 708 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 SERTAD1Q9UHV2 236 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 CAVIN2O95810 425 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 CYP2D6P10635 497 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 TOP1P11387 765 aaKnown RBP11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 ATP2B2Q01814 1243 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 GRIN1Q05586 938 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 NOSTRINQ8IVI9 506 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 IGDCC4Q8TDY8 1250 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 PCDHA5Q9Y5H7 936 aa11.99□□□□□ -0.49
CPSF1P1-201ENST00000397477 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 FANCCQ00597 558 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 ADGRA1Q86SQ6 560 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 MAPK8IP1Q9UQF2 711 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 C5P01031 1676 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 DCCP43146 1447 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 VWA3AA6NCI4 1184 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 CMA1P23946 247 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 RPS8P62241 208 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms