RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 DDNO94850 711 aaPredicted RBP28.98■■■□□ 2.23
CTF1-202ENST00000395019 FGD1P98174 961 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 KIAA0825Q8IV33 1275 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 LRRC2Q9BYS8 371 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 PPP4CP60510 307 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 ST3GAL1Q11201 340 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 TNIP1Q15025 636 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 CCDC83Q8IWF9 413 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 BRF1Q92994 677 aa28.98■■■□□ 2.23
CTF1-202ENST00000395019 MROH7-TTC4A0A0A0MT08 1334 aa28.97■■■□□ 2.23
CTF1-202ENST00000395019 FKBP1AP62942 108 aaKnown RBP28.97■■■□□ 2.23
CTF1-202ENST00000395019 ANAPC4Q9UJX5 808 aa28.97■■■□□ 2.23
CTF1-202ENST00000395019 PRC1O43663 620 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 BAG3O95817 575 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 GMPSP49915 693 aaPredicted RBP28.96■■■□□ 2.23
CTF1-202ENST00000395019 DIXDC1Q155Q3 683 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 AKNAD1Q5T1N1 836 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 CERS3Q8IU89 383 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 SLF2Q8IX21 1173 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 STAG1Q8WVM7 1258 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 FAM163AQ96GL9 167 aaPredicted RBP28.96■■■□□ 2.23
CTF1-202ENST00000395019 ATP8A2Q9NTI2 1148 aa28.96■■■□□ 2.23
CTF1-202ENST00000395019 ANTXR2P58335 489 aa28.95■■■□□ 2.23
CTF1-202ENST00000395019 CTDSPL2Q05D32 466 aa28.95■■■□□ 2.23
CTF1-202ENST00000395019 PPARAQ07869 468 aa28.95■■■□□ 2.23
CTF1-202ENST00000395019 NBR1Q14596 966 aa28.95■■■□□ 2.23
CTF1-202ENST00000395019 NECAB1Q8N987 351 aa28.95■■■□□ 2.23
CTF1-202ENST00000395019 CNNM2Q9H8M5 875 aa28.95■■■□□ 2.23
CTF1-202ENST00000395019 CHST3Q7LGC8 479 aa28.94■■■□□ 2.22
CTF1-202ENST00000395019 GPC2Q8N158 579 aa28.94■■■□□ 2.22
CTF1-202ENST00000395019 ZC3H4Q9UPT8 1303 aaKnown RBP28.94■■■□□ 2.22
CTF1-202ENST00000395019 SCNN1DP51172 638 aa28.94■■■□□ 2.22
CTF1-202ENST00000395019 TNPO1Q92973 898 aaKnown RBP28.94■■■□□ 2.22
CTF1-202ENST00000395019 NOL10Q9BSC4 688 aaKnown RBP28.94■■■□□ 2.22
CTF1-202ENST00000395019 RNF41Q9H4P4 317 aaPredicted RBP28.94■■■□□ 2.22
CTF1-202ENST00000395019 TTF2Q9UNY4 1162 aaKnown RBP28.94■■■□□ 2.22
CTF1-202ENST00000395019 SMC3Q9UQE7 1217 aa28.94■■■□□ 2.22
CTF1-202ENST00000395019 NEDD4P46934 1319 aa28.93■■■□□ 2.22
CTF1-202ENST00000395019 EVCP57679 992 aa28.93■■■□□ 2.22
CTF1-202ENST00000395019 MFSD6Q6ZSS7 791 aa28.93■■■□□ 2.22
CTF1-202ENST00000395019 KRT23Q9C075 422 aa28.93■■■□□ 2.22
CTF1-202ENST00000395019 DCP1AQ9NPI6 582 aaPredicted RBP28.93■■■□□ 2.22
CTF1-202ENST00000395019 PCDHAC2Q9Y5I4 1007 aa28.93■■■□□ 2.22
CTF1-202ENST00000395019 GPR75-ASB3A0A0A6YYF3 556 aa28.92■■■□□ 2.22
CTF1-202ENST00000395019 AGBL3Q8NEM8 1001 aa28.92■■■□□ 2.22
CTF1-202ENST00000395019 TACC3Q9Y6A5 838 aa28.92■■■□□ 2.22
CTF1-202ENST00000395019 GAKO14976 1311 aa28.92■■■□□ 2.22
CTF1-202ENST00000395019 MYO3BQ8WXR4 1341 aa28.92■■■□□ 2.22
CTF1-202ENST00000395019 B4E1Z4 1266 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 GTF3C6Q969F1 213 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 ZNF274Q96GC6 653 aaPredicted RBP28.91■■■□□ 2.22
CTF1-202ENST00000395019 MINDY4BA8MYZ0 360 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 PFKFB2O60825 505 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 APOBRQ0VD83 1088 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 PKP1Q13835 747 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 CTR9Q6PD62 1173 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 CYB5R4Q7L1T6 521 aa28.91■■■□□ 2.22
CTF1-202ENST00000395019 GLTPD2A6NH11 291 aa28.9■■■□□ 2.22
CTF1-202ENST00000395019 SBK1Q52WX2 424 aa28.9■■■□□ 2.22
CTF1-202ENST00000395019 NKX2-3Q8TAU0 364 aa28.9■■■□□ 2.22
CTF1-202ENST00000395019 SH3RF3Q8TEJ3 882 aaPredicted RBP28.9■■■□□ 2.22
CTF1-202ENST00000395019 INCENPQ9NQS7 918 aa28.9■■■□□ 2.22
CTF1-202ENST00000395019 BTDP43251 543 aa28.89■■■□□ 2.22
CTF1-202ENST00000395019 TMEM87BQ96K49 555 aa28.89■■■□□ 2.22
CTF1-202ENST00000395019 ARPP21Q9UBL0 812 aaPredicted RBP28.89■■■□□ 2.22
CTF1-202ENST00000395019 MKRN1Q9UHC7 482 aaKnown RBP28.89■■■□□ 2.22
CTF1-202ENST00000395019 ZDHHC9Q9Y397 364 aa28.89■■■□□ 2.22
CTF1-202ENST00000395019 WDR90Q96KV7 1748 aa28.89■■■□□ 2.21
CTF1-202ENST00000395019 USP17L12C9JPN9 530 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 USP17L21D6R901 530 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 EGFRP00533 1210 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 PCP11498 1178 aaKnown RBP28.88■■■□□ 2.21
CTF1-202ENST00000395019 PLCG2P16885 1265 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 STK3Q13188 491 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 MICALL2Q8IY33 904 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 CDK5RAP2Q96SN8 1893 aa28.88■■■□□ 2.21
CTF1-202ENST00000395019 USP17L8P0C7I0 530 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 RPS12P25398 132 aaKnown RBP28.87■■■□□ 2.21
CTF1-202ENST00000395019 GPHNQ9NQX3 736 aaPredicted RBP28.87■■■□□ 2.21
CTF1-202ENST00000395019 CNOT7Q9UIV1 285 aaKnown RBP28.87■■■□□ 2.21
CTF1-202ENST00000395019 BAZ2AQ9UIF9 1905 aaKnown RBP28.87■■■□□ 2.21
CTF1-202ENST00000395019 ECM29Q5VYK3 1845 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 BRD1O95696 1058 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 FGRP09769 529 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 GJB2P29033 226 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 PDIA3P30101 505 aaKnown RBP28.87■■■□□ 2.21
CTF1-202ENST00000395019 USP5P45974 858 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 DPY19L2Q6NUT2 758 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 CLEC17AQ6ZS10 378 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 DPF2Q92785 391 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 GPRC5DQ9NZD1 345 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 ZSWIM5Q9P217 1185 aa28.87■■■□□ 2.21
CTF1-202ENST00000395019 SH2B2O14492 632 aaPredicted RBP28.86■■■□□ 2.21
CTF1-202ENST00000395019 KDM4AO75164 1064 aa28.86■■■□□ 2.21
CTF1-202ENST00000395019 SCRN1Q12765 414 aa28.86■■■□□ 2.21
CTF1-202ENST00000395019 CHMP4CQ96CF2 233 aa28.86■■■□□ 2.21
CTF1-202ENST00000395019 MTA3Q9BTC8 594 aa28.86■■■□□ 2.21
CTF1-202ENST00000395019 ANGEL1Q9UNK9 670 aaKnown RBP28.86■■■□□ 2.21
CTF1-202ENST00000395019 SCN4AP35499 1836 aa28.85■■■□□ 2.21
CTF1-202ENST00000395019 CYP2D7A0A087X1C5 515 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms