RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 KRT2P35908 639 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 POLE2P56282 527 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 PPP1R7Q15435 360 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 GIMAP6Q6P9H5 292 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 HORMAD1Q86X24 394 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 TRIM58Q8NG06 486 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 STAMBPL1Q96FJ0 436 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 WBP11Q9Y2W2 641 aaKnown RBP10.06□□□□□ -0.8
CHD2-201ENST00000394196 I3L4J1 428 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 ZNF500O60304 480 aaPredicted RBP10.06□□□□□ -0.8
CHD2-201ENST00000394196 HMOX1P09601 288 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
CHD2-201ENST00000394196 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHD2-201ENST00000394196 PFDN4Q9NQP4 134 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 TBC1D23Q9NUY8 699 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 C6orf203Q9P0P8 240 aaPredicted RBP10.06□□□□□ -0.8
CHD2-201ENST00000394196 MTMR7Q9Y216 660 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 ERCC6Q03468 1493 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHD2-201ENST00000394196 SRGAP1Q7Z6B7 1085 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 CUL5Q93034 780 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 EXOC4Q96A65 974 aa10.06□□□□□ -0.8
CHD2-201ENST00000394196 C8orf74Q6P047 294 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 PHKBQ93100 1093 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 DNAJC25Q9H1X3 360 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 CXorf56Q9H5V9 222 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 KLHL14Q9P2G3 628 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 AKR1B15C9JRZ8 316 aaPredicted RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 RFWD2Q8NHY2 731 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD2-201ENST00000394196 SCHIP1Q9P0W5 487 aaPredicted RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 PRDM1O75626 825 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 CLTAP09496 248 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 PSME1Q06323 249 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 SYT10Q6XYQ8 523 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 GINS4Q9BRT9 223 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 NAPBQ9H115 298 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 RAB14P61106 215 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 TCERG1LQ5VWI1 586 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 CNGA2Q16280 664 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 ANKRD20A3Q5VUR7 823 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 BIN2Q9UBW5 565 aaPredicted RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 ZNF483Q8TF39 744 aaPredicted RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 SIL1Q9H173 461 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 EPS15L1Q9UBC2 864 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD2-201ENST00000394196 LRRIQ3A6PVS8 624 aaPredicted RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 TPD52L2O43399 206 aaKnown RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 IARSP41252 1262 aaKnown RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
CHD2-201ENST00000394196 NLRP9Q7RTR0 991 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 NEK11Q8NG66 645 aa10.05□□□□□ -0.8
CHD2-201ENST00000394196 OAS2P29728 719 aaKnown RBP10.04□□□□□ -0.8
CHD2-201ENST00000394196 SEL1L2Q5TEA6 688 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 ERMNQ8TAM6 284 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 FGD4Q96M96 766 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 RAD21L1Q9H4I0 556 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 PHACTR2O75167 634 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 E2F6O75461 281 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 FCHSD2O94868 740 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
CHD2-201ENST00000394196 TNIP2Q8NFZ5 429 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 HOMER3Q9NSC5 361 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 HDAC4P56524 1084 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 CYP26C1Q6V0L0 522 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 MCM10Q7L590 875 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 NLRP7Q8WX94 980 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 CCT6BQ92526 530 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 RAB17Q9H0T7 212 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 ZFYVE1Q9HBF4 777 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 DONSONQ9NYP3 566 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 ZNF445P59923 1031 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 TUBA1BP68363 451 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 TUBA1AQ71U36 451 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 FGD6Q6ZV73 1430 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 CERS3Q8IU89 383 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 SYCP3Q8IZU3 236 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 RHOXF2BP0C7M4 288 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 RHOXF2Q9BQY4 288 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 FAM169AQ9Y6X4 670 aa10.04□□□□□ -0.8
CHD2-201ENST00000394196 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
CHD2-201ENST00000394196 C6orf118Q5T5N4 469 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 MAP3K7O43318 606 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 U2AF2P26368 475 aaKnown RBP eCLIP10.03□□□□□ -0.86e-7■■■□□ 15.8
CHD2-201ENST00000394196 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 STAT6P42226 847 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 TTF1Q15361 905 aaPredicted RBP10.03□□□□□ -0.8
CHD2-201ENST00000394196 USP48Q86UV5 1035 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 CTAGE3PQ8IX95 158 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 ENOX1Q8TC92 643 aaKnown RBP10.03□□□□□ -0.8
CHD2-201ENST00000394196 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
CHD2-201ENST00000394196 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
CHD2-201ENST00000394196 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
CHD2-201ENST00000394196 MRPL28Q13084 256 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms