RNA–Protein interactions for RNA: ENST00000391218.1

RNU6-1250P-201, Transcript of RNA, U6 small nuclear 1250, pseudogene, humanhuman

BASIC

Gene RNU6-1250P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1250P-201ENST00000391218 WWC2-AS2Q96NR7 200 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 OCSTAMPQ9BR26 566 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 WACQ9BTA9 647 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 LACRTQ9GZZ8 138 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 DNAJC25Q9H1X3 360 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZNF552Q9H707 407 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SRA1Q9HD15 236 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ATP13A1Q9HD20 1204 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 BRD7Q9NPI1 651 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 C1GALT1Q9NS00 363 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TXLNGQ9NUQ3 528 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SIRT5Q9NXA8 310 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 WWOXQ9NZC7 414 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 EGFL7Q9UHF1 273 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FBXO3Q9UK99 471 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ATP1B4Q9UN42 357 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 CEP131Q9UPN4 1083 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZKSCAN5Q9Y2L8 839 aa-0.01□□□□□ -2.41
RNU6-1250P-201ENST00000391218 COL3A1P02461 1466 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NPEPPSL1A6NEC2 478 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 OPLAHO14841 1288 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FSCN2O14926 492 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 KRT86O43790 486 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TRAK2O60296 914 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 LEFTY1O75610 366 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TIAF1O95411 115 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 C1SP09871 688 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SDHBP21912 280 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 HOXC13P31276 330 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TAF6P49848 677 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 HNRNPA3P51991 378 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NCKAP1LP55160 1127 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 HNRNPKP61978 463 aaKnown RBP eCLIP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 MTMR2Q13614 643 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 KRT81Q14533 505 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NKX1-1Q15270 411 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 VWA3BQ502W6 1294 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NAALADL2Q58DX5 795 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 RALGPS1Q5JS13 557 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 KANK4Q5T7N3 995 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FNDC7Q5VTL7 733 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NUTM2GQ5VZR2 741 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 HIST2H2BCQ6DN03 193 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ADAMTSL4Q6UY14 1074 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZNF517Q6ZMY9 492 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 KRT25Q7Z3Z0 450 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 KRT77Q7Z794 578 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 DZIP3Q86Y13 1208 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TREML1Q86YW5 311 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 IGDCC3Q8IVU1 814 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FIBCD1Q8N539 461 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZNF276Q8N554 614 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 RBMXL3Q8N7X1 1067 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 C1orf127Q8N9H9 656 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FAM98AQ8NCA5 519 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SIMC1Q8NDZ2 872 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 DBF4BQ8NFT6 615 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZNF526Q8TF50 670 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 MZB1Q8WU39 189 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TSC1Q92574 1164 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 EZH1Q92800 747 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 EXTL1Q92935 676 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 RGMAQ96B86 450 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 CLIP3Q96DZ5 547 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 XAGE2Q96GT9 111 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZNF414Q96IQ9 312 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NECAB3Q96P71 396 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 PNMA5Q96PV4 448 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NIFKQ9BYG3 293 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SLC6A17Q9H1V8 727 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NEUROD4Q9HD90 331 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 ZNF358Q9NW07 568 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 PROCRQ9UNN8 238 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 INVSQ9Y283 1065 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FRMD4BQ9Y2L6 1034 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TCAF1Q9Y4C2 921 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 DAGLAQ9Y4D2 1042 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 PPME1Q9Y570 386 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 GTF3C5Q9Y5Q8 519 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 USP3Q9Y6I4 520 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 NOTCH1P46531 2555 aa-0.02□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SETD1BQ9UPS6 1966 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 MACF1Q9UPN3 7388 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 SFI1A8K8P3 1242 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 PRSS47A8MTI9 375 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 RBAK-RBAKDNI3L0D1 243 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 U2SURPO15042 1029 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 RGL2O15211 777 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 FOXN1O15353 648 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 GPR42O15529 346 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 DLGAP3O95886 979 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 GNRH1P01148 92 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 LMNAP02545 664 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 HPXP02790 462 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 PROZP22891 400 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 MT3P25713 68 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 VIPR1P32241 457 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 MLLT3P42568 568 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 PLCB3Q01970 1234 aa-0.03□□□□□ -2.41
RNU6-1250P-201ENST00000391218 TYRO3Q06418 890 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms